DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8950 and TFC4

DIOPT Version :9

Sequence 1:NP_001246384.1 Gene:CG8950 / 36921 FlyBaseID:FBgn0034186 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_011561.3 Gene:TFC4 / 852938 SGDID:S000003279 Length:1025 Species:Saccharomyces cerevisiae


Alignment Length:1069 Identity:200/1069 - (18%)
Similarity:376/1069 - (35%) Gaps:308/1069 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 EEIDSNDVPENELEQFQETEPLRVVDIIDCDTDGERRCIADDEEEGALIKRYVQGVQCLEFPDFC 76
            ||.|..|||.:  .|..|.|                   .:.|.:.:|:         .||.|:.
Yeast    47 EEYDDEDVPHD--LQLSEDE-------------------YNSERDSSLL---------AEFSDYG 81

  Fly    77 TKLEASDEDEEGNDEEPSEAAGSIEKPNTSAQAKTSQEQSTGSGRSGGGGFRKSQLSTALQGLMG 141
               |.|::|||.......||          :..|..:::....|:|.|...::..|...:..|:.
Yeast    82 ---EISEDDEEDFMNAIREA----------SNFKVKKKKKNDKGKSYGRQRKERVLDPEVAQLLS 133

  Fly   142 EANLSFVYGRYETAERICMEIIRQNPLASEPFYTLAEIYENRDEVK-FLNFSTLAAHLNPQDRDM 205
            :||.:||....:.|||:..|:|:::......:.||.:||:.:..:. ..|...||||||..|.:.
Yeast   134 QANEAFVRNDLQVAERLFNEVIKKDARNFAAYETLGDIYQLQGRLNDCCNSWFLAAHLNASDWEF 198

  Fly   206 WIRVSDLLVQQGNLARARLIYTKAIKMLPKVYQLRLRKAQLLQKMGETNASMFTYLKMLPLMPPD 270
            |..|:.|.....::.:|...:::.|.:.|..::...|::.|.:|.|:...::..:.::....|.|
Yeast   199 WKIVAILSADLDHVRQAIYCFSRVISLNPMEWESIYRRSMLYKKTGQLARALDGFQRLYMYNPYD 263

  Fly   271 EWKMCLNTAKNVARYFHVL----------------------EKHSLALEAMEGAYSVCGARFTLE 313
                     .|:.|...:|                      |:....|.|:|.|..........|
Yeast   264 ---------ANILRELAILYVDYDRIEDSIELYMKVFNANVERREAILAALENALDSSDEESAAE 319

  Fly   314 --------------------DIN-----------------------IYLELLILNKQYAKVL-RC 334
                                |||                       ::|:|.:......|.: :|
Yeast   320 GEDADEKEPLEQDEDRQMFPDINWKKIDAKYKCIPFDWSSLNILAELFLKLAVSEVDGIKTIKKC 384

  Fly   335 LR------------------ERTNFELENDQEESL-----ELIYFCEIPDDYVPELRAKLCVSLI 376
            .|                  |..|...:|...:||     |..|  .||.|    :|.:|  .|:
Yeast   385 ARWIQRRESQTFWDHVPDDSEFDNRRFKNSTFDSLLAAEKEKSY--NIPID----IRVRL--GLL 441

  Fly   377 HMRAHHLLGYLIQNVQEHITLTADRVELYMDITEALMQEHKYAEAIALMSPI--------TDGDT 433
            .:...:|:..|......:....:|..:||.:...||.:..||.|||...:|:        ||   
Yeast   442 RLNTDNLVEALNHFQCLYDETFSDVADLYFEAATALTRAEKYKEAIDFFTPLLSLEEWRTTD--- 503

  Fly   434 VECPAFVWLRQAECLRQLNRTNEAIQSYEKVVQLAPFCYDARFTLSAL----------------L 482
                  |:...|.|.:::.....|.:.||..::..|...|.|.:|:.:                :
Yeast   504 ------VFKPLARCYKEIESYETAKEFYELAIKSEPDDLDIRVSLAEVYYRLNDPETFKHMLVDV 562

  Fly   483 KQQGRH--EEAVQAL------EQPGEAEGQPLI--------------------ARLLYERCVMLQ 519
            .:..:|  :|.:..:      ....:...:||:                    .|:..||.:..:
Yeast   563 VEMRKHQVDETLHRISNEKSSNDTSDISSKPLLEDSKFRTFRKKKRTPYDAERERIERERRITAK 627

  Fly   520 QIGRIEEF----LDVGYALLSRHSIKLYNREEMMAAANG--------------GSAYNSESLKTI 566
            .:.:.|:.    |:.|.....:.||.:....|::...:.              |....::...|.
Yeast   628 VVDKYEKMKKFELNSGLNEAKQASIWINTVSELVDIFSSVKNFFMKSRSRKFVGILRRTKKFNTE 692

  Fly   567 IQMRSKAVDNSAEQD--LQDP------AKNAASETSDLTVKDEFELFRELVRTAFKHGMHSAAEK 623
            :..:.:.:...||.|  .:.|      ...:|:|...|:.:..||||.||.....|   :.:.|.
Yeast   693 LDFQIERLSKLAEGDSVFEGPLMEERVTLTSATELRGLSYEQWFELFMELSLVIAK---YQSVED 754

  Fly   624 ICFAMVTTKRFTYYHHEIERI-------MVLTCYYNDDCAIA---------FSYLREL------- 665
            ....:.|.:....:..:.||:       :.:....:|:..:|         |.:.|::       
Yeast   755 GLSVVETAQEVNVFFQDPERVKMMKFVKLAIVLQMDDEEELAENLRGLLNQFQFNRKVLQVFMYS 819

  Fly   666 IAKQPSQTTLWNMLSLMIQKGDEVRYY------RYMRRLMQRHPVDTKPMRIFQGHYHLNCASFK 724
            :.:.||..   |:||..||:...:|..      ||...:..:..:..|.:      |:.|..|..
Yeast   820 LCRGPSSL---NILSSTIQQKFFLRQLKAFDSCRYNTEVNGQASITNKEV------YNPNKKSSP 875

  Fly   725 YALNIYMPILREN------------------PDPLVALCIAVAFNQLSLQKKVLRKSASVAQAVA 771
            |...||..:|..:                  .||:|.|.:.::....::|:...::...:...:.
Yeast   876 YLYYIYAVLLYSSRGFLSALQYLTRLEEDIPDDPMVNLLMGLSHIHRAMQRLTAQRHFQIFHGLR 940

  Fly   772 FGQRYKELRSAGHELADCAAQQEIFYNIGRIYHQANILHLAVDYYEKALAVPVHPLIAEHESTLG 836
            :..||.::|.:   |.....:||..||:||.:|...::.:|::||.:.|         |:.....
Yeast   941 YLYRYHKIRKS---LYTDLEKQEADYNLGRAFHLIGLVSIAIEYYNRVL---------ENYDDGK 993

  Fly   837 LQHEVAFNLHLIYRANGNKWKARQYLMRY 865
            |:...|:|..:||:.:||...|...:.:|
Yeast   994 LKKHAAYNSIIIYQQSGNVELADHLMEKY 1022

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8950NP_001246384.1 TPR repeat 139..164 CDD:276809 9/24 (38%)
TPR repeat 169..198 CDD:276809 8/29 (28%)
TPR repeat 203..231 CDD:276809 4/27 (15%)
TPR 219..497 CDD:223533 66/398 (17%)
TPR repeat 237..264 CDD:276809 4/26 (15%)
TPR repeat 276..304 CDD:276809 8/49 (16%)
TPR repeat 402..430 CDD:276809 10/35 (29%)
TPR repeat 435..467 CDD:276809 6/31 (19%)
TPR_19 448..510 CDD:291240 11/105 (10%)
TPR repeat 472..497 CDD:276809 5/48 (10%)
TPR_12 795..864 CDD:290160 18/68 (26%)
TFC4NP_011561.3 PEP_TPR_lipo <124..551 CDD:274350 90/452 (20%)
TPR repeat 164..190 CDD:276809 7/25 (28%)
TPR repeat 197..224 CDD:276809 4/26 (15%)
TPR repeat 229..259 CDD:276809 4/29 (14%)
TPR repeat 264..290 CDD:276809 3/25 (12%)
TPR repeat 467..495 CDD:276809 10/27 (37%)
TPR repeat 501..531 CDD:276809 8/38 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342062
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2076
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 144 1.000 Inparanoid score I1164
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55439
OrthoFinder 1 1.000 - - FOG0005249
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103511
Panther 1 1.100 - - LDO PTHR23082
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1326
SonicParanoid 1 1.000 - - X4262
TreeFam 1 0.960 - -
1110.880

Return to query results.
Submit another query.