DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8950 and AT1G17680

DIOPT Version :10

Sequence 1:NP_611184.1 Gene:CG8950 / 36921 FlyBaseID:FBgn0034186 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_173210.3 Gene:AT1G17680 / 838344 AraportID:AT1G17680 Length:896 Species:Arabidopsis thaliana


Alignment Length:980 Identity:216/980 - (22%)
Similarity:351/980 - (35%) Gaps:280/980 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DCDTDGERRCIADDEEEGALIKRYVQGVQCLEFPDFCTKLEASDEDEEG--NDEEPSEAAGSI-- 100
            |.|.:.:...:.||:::.                        ||:|:||  ::||....|||:  
plant    42 DKDLNSDEEGLVDDDDDD------------------------SDDDDEGDESEEEDDFEAGSVPN 82

  Fly   101 --EKPNTSAQAKTSQEQSTGSGR---------SGGGGF---------RKS--------------Q 131
              |:|...|.|:..::....|.|         ||..||         |||              :
plant    83 TFERPEYEALAERKRKALADSQRNPSNISNSTSGVEGFMEFMSSGRRRKSRKYKKKGRRPGSKKE 147

  Fly   132 LSTALQGLMGEANLSFVYGRYETAERICMEIIRQNPLASEPFYTLAEIYE--NRDEVKFLNFSTL 194
            ::..:.....||.....:||...|..|.:|:|:|.|.....:|.|:.:.|  .:.|........:
plant   148 VAPDILKRFREALFLHAHGRDIEALPILVEVIKQAPAFDIAYYYLSRVSEQLGKTESSSTEALKI 212

  Fly   195 AAHLNPQDRDMWIRVSDLLVQQGNLARARLIYTKAIKMLPKVYQLRLRKAQLLQKMGETNASMFT 259
            ||::.......|..:.:...:|.|::.||...:|||:..|....|:...|.:             
plant   213 AANIKGSKSPFWKLLYERFKEQENISVARSYASKAIQADPDDIPLKYEYADI------------- 264

  Fly   260 YLKMLPLMPPDEWKMCLNTAKNVARYFHVLEKHSLALEAMEGAYSVCGARFTLEDINIYLELLIL 324
                           ||||.           |:..|.|..|..:..|..|         :|.|..
plant   265 ---------------CLNTG-----------KYREAAETFEQIFRRCPER---------IEALKW 294

  Fly   325 NKQY----------AKVLRCLRERTNFELEND--------------QEESLELIY----FCEIPD 361
            ..||          |.:|....:..:.|:.:|              .:.:|:.|:    ...:..
plant   295 GVQYFLKSGEGERAASILEDHIKSHSSEVGHDVLDLLASVFMKINAHDRALKYIHDVRQIYNVGK 359

  Fly   362 DYVPELRAKLCVSLIHM----RAHHLLGYLIQN-VQEH---ITLTADRVELYMDITEALMQEHKY 418
            :....|:.:..:..:|:    :|..:|..|.|. |.||   ||..||.:....:...||..   |
plant   360 ELSSSLKIRQAICHVHLEEMEQAESVLSILPQEAVSEHPELITNLADELTNIGNFHSALKY---Y 421

  Fly   419 AEAIALMSPITDGDTVECPAFVWLRQAECLRQLNRTNEAIQSYEKVVQLAPFCYDARFTLSALLK 483
            .|||:  .|:...        ::::.|.|...|....:||..|.|.:.......|.|.||::||.
plant   422 IEAIS--EPVNGN--------LFVKIARCYMSLEERKQAIVFYYKALNELSDTVDVRITLASLLL 476

  Fly   484 QQGRHEEAVQALEQPGEAEGQPLIARL---------LYERCVMLQQIGRIEEFLDVGYAL----- 534
            :.|:.:|||..|..|...:  |..|:|         ....|.:....|.:|:|.:....|     
plant   477 EDGKRDEAVLVLSPPENPD--PDTAKLKAWWKNRKIRMNLCQIYHSEGMLEDFANTALQLVLKWV 539

  Fly   535 -------------LSRHSIKLYNREEMMAAAN----GGSAYNS--ESLKTIIQMRSKAVDNSAEQ 580
                         ||.|......|....|.|:    |...:..  .:|....::|.:|...:..:
plant   540 WRRTVKGKRKRLVLSEHQRNKKRRRPRDAQASQLRGGPKKWRKIRATLNETRRIRERAAIKAHNE 604

  Fly   581 DLQDPAKNAASETSDLTVKDE--FELFRELVRT-AFKHGMHSAAEKICFAM--------VTTKRF 634
            |:       .||:.:..:|||  ..||.:|.:. |.......|.|.:..|.        |.||: 
plant   605 DV-------CSESEEEVIKDEEYHRLFVDLCKALASLQRYWEALEIVNLARRLDAKMLPVETKK- 661

  Fly   635 TYYHHEIERI-MVLTCYYND-----DCAIAFSYLRELIAKQPSQTTLWNMLSLMIQKGDEVRYYR 693
                 |::.: ..::|...|     ||      :|.:|.:.|.:...||.            ||.
plant   662 -----ELQSLGAKISCDTMDPKQWFDC------VRSVIQQHPYRLNAWNC------------YYS 703

  Fly   694 YMRRLMQRHPVDTK-------------PMRIFQGHYHLNCASFKYALNIYMPILRENPD-PLVAL 744
            .:.||.:|...:.|             |..:..||:....:..:.|...|:...:..|: ||:.|
plant   704 VISRLGKRASTEAKFMHHLRSKYRDCVPPILIAGHHFTVTSRHQDAAREYLEAYKLMPESPLINL 768

  Fly   745 CIAVAFNQLSLQKKVLRKSASVAQAVAFGQRYKELRSAGHELADCAAQQEIFYNIGRIYHQANIL 809
            |:..|...|:|..::..:...:||..||  .|..||.       |:..||..||:.|.|....::
plant   769 CVGAALINLALGFRLKNRHECLAQGFAF--LYNNLRI-------CSNSQEALYNVARAYQHVGLV 824

  Fly   810 HLAVDYYEKALAV-----------PVHPLIAEHESTLG--LQHEVAFNLHLIYRANGNKWKARQY 861
            .||..||||.||:           ...|::||....:.  |:.|.|.||||||:.:|....|||.
plant   825 TLAASYYEKVLAIYEKDYTMPKLPNEDPIVAEERKPVNCDLRKEAAHNLHLIYKHSGAFDLARQV 889

  Fly   862 LMRYC 866
            |..:|
plant   890 LKDHC 894

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8950NP_611184.1 BepA 133..268 CDD:443813 27/136 (20%)
TPR repeat 139..164 CDD:276809 7/24 (29%)
TPR repeat 169..198 CDD:276809 6/30 (20%)
TPR repeat 203..231 CDD:276809 7/27 (26%)
TPR repeat 237..264 CDD:276809 2/26 (8%)
Spy 318..>515 CDD:443119 52/241 (22%)
TPR repeat 402..430 CDD:276809 7/27 (26%)
TPR repeat 435..467 CDD:276809 7/31 (23%)
LapB 438..702 CDD:442196 67/313 (21%)
TPR repeat 472..497 CDD:276809 11/24 (46%)
AT1G17680NP_173210.3 LapB <155..350 CDD:442196 47/242 (19%)
TPR repeat 156..181 CDD:276808 8/24 (33%)
TPR repeat 186..213 CDD:276808 4/26 (15%)
TPR repeat 224..249 CDD:276809 7/24 (29%)
TPR repeat 254..284 CDD:276809 10/68 (15%)
LapB 259..535 CDD:442196 67/338 (20%)
TPR repeat 289..317 CDD:276809 6/27 (22%)
TPR repeat 367..395 CDD:276809 5/27 (19%)
TPR repeat 398..426 CDD:276809 9/30 (30%)
TPR repeat 430..460 CDD:276809 7/37 (19%)
DnaG_DnaB_bind <611..666 CDD:447551 14/60 (23%)
Spy 745..>837 CDD:443119 31/100 (31%)

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