DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8950 and gtf3c3

DIOPT Version :9

Sequence 1:NP_001246384.1 Gene:CG8950 / 36921 FlyBaseID:FBgn0034186 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_001243171.1 Gene:gtf3c3 / 553318 ZFINID:ZDB-GENE-040914-80 Length:918 Species:Danio rerio


Alignment Length:890 Identity:270/890 - (30%)
Similarity:438/890 - (49%) Gaps:121/890 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 DGERRCI--ADDEEEGALIKRYVQGVQCLEFPDFCTKLEASD-EDEEGNDEEPSEAAGSIEKPNT 105
            :|...|:  .||:|:|                    |:|..| |:|:|:|::..:     :..|.
Zfish    85 EGLEECVDDDDDDEDG--------------------KMEWKDIEEEDGDDDDDDD-----DDDNN 124

  Fly   106 SAQAKTSQEQSTGSGRSGGGGF------------------RKSQLSTALQGLMGEANLSFVYGRY 152
            .|    .:|:..|:|.:.|..|                  .:|:|..||:|||||||:.:..|..
Zfish   125 DA----DEEEEDGNGITPGDVFALEMELNRENKKMMKERRHRSKLPRALRGLMGEANIRYARGDK 185

  Fly   153 ETAERICMEIIRQNPLASEPFYTLAEIYENR-DEVKFLNFSTLAAHLNPQDRDMWIRVSDLLVQQ 216
            |.|..:|||||||.|:|.|||.|:|.|||:: |..|.|.|..:||||||.|.:.|::::|:.::|
Zfish   186 EDAILMCMEIIRQAPVAYEPFSTMAMIYEDQGDMEKALQFGLIAAHLNPSDCEEWVKLADMSLEQ 250

  Fly   217 GNLARARLIYTKAIKMLPKVYQLRLRKAQLLQKMGETNASMFTYLKMLPLMPPDEWKMCLNTAKN 281
            .|:.:|.:.||||||......|....::.|.:::||...:|..|.::|.|:||.:.:..:..:::
Zfish   251 DNIKQAIICYTKAIKYDSSNVQYLWERSSLYEQVGEHKQAMDGYRRILSLLPPTDGEHFMQLSRD 315

  Fly   282 VARYFHVLEKHSLALEAMEGAYSVCGARFTLEDINIYLELLILNKQYAKVLRCL----------R 336
            :|:.::...:...|:..||.|........|.|.:|:..||.|.|.|:.|.|..|          :
Zfish   316 MAKSYYESSELPSAIGVMEEALERHPELVTHECVNMAAELFIANHQHDKALEALVKFCGIVLKRQ 380

  Fly   337 ERTNFELE-------------NDQEESLELIYFCEIPDDYVPELRAKLCVSLIHMRAHHLLGYLI 388
            |:...:||             .|.||....:....|||....::|||:.|.|||.:....|..::
Zfish   381 EKVETKLEEQTLTQDTEEDTKEDTEEEKGKVIEVVIPDAVPIDIRAKMMVCLIHQQVFKPLDPML 445

  Fly   389 QNVQEHITLTADRVELYMDITEALMQEHKYAEAIALMSPITDGDTVECPAFVWLRQAECLRQLNR 453
            .::.|.  ...:..:||:|:.||.|:|.:|..|:.|:|.:...:.... |.||||.||||:.|..
Zfish   446 TSLMEQ--SPEELGDLYLDVAEAFMEEGEYNSALPLLSALVCSERYNL-AVVWLRHAECLKALGH 507

  Fly   454 TNEAIQSYEKVVQLAPFCYDARFTLSALLKQQGRHEEAVQALE---------QPGEAEGQPLIAR 509
            ...|::||.|||::||...:||..||.|.:|.||...|::|||         |...|..|.|  :
Zfish   508 LEVAVKSYSKVVEMAPLHLEARLALSTLQQQLGRPNMALEALEPMYDAETLAQDSSAAQQEL--K 570

  Fly   510 LLYERCVMLQQIGRIEEFLDVGYALLSRHSIKLYNREEMMAAANGGSAYNSESLKTIIQMRS--- 571
            ||..|..:|...||:::::|....:||........|.::...|:..|..  :.||.|...||   
Zfish   571 LLLHRSTLLLSQGRMDDYIDTVLTMLSMFLKVAMVRAQVCVVADMSSGV--KHLKLIKVSRSALT 633

  Fly   572 KAVDNSAEQDLQDPAKNAASETSDLTVKDEFELFRELVRTAFKHGMHSAAEKICFAMVTTKRFTY 636
            :.||..|..      .:...:||.|:..|.::|....:....:....:.||.:..:  |.:.:::
Zfish   634 EIVDQEAAY------LDVTGKTSVLSKDDWWKLSLRCLSVLCEEKRFAEAELLVDS--TLEYYSF 690

  Fly   637 Y-----HHEIERIMVLTCYYNDDCAIAFSYLRELIAKQPSQTTLWNMLSLMIQKGDEVRYYRYMR 696
            |     ..|:|.:.:...:.:.:...|::|:|.::.....:..|||:.:.:.....:.|::|:..
Zfish   691 YDDRVKRKELEYLGLSAAFLDHNFRTAYNYIRLMLMDSVERPQLWNVFNQITLHSQDARHHRFCL 755

  Fly   697 RLMQRHPVDTKPMRIFQGHYHLNCASFKYALNIYMPILRENPD-PLVALCIAVAFNQLSLQKKVL 760
            |||.:|| |...:.:..||..|...:||:||..||...|..|| ||.:|.|.:.|..::.||.|:
Zfish   756 RLMLKHP-DNHALYLLNGHTSLVSGTFKHALGQYMQAFRNEPDHPLHSLAIGLTFFHMACQKFVM 819

  Fly   761 RKSASVAQAVAFGQRYKELRSAGHELADCAAQQEIFYNIGRIYHQANILHLAVDYYEKALAVPVH 825
            ::.:...|..:|..||.:||      ..|   ||..||:||..||..:.|||:.||||||.:|  
Zfish   820 KRHSLTVQGFSFLWRYVDLR------GQC---QESLYNLGRALHQLGLTHLAIHYYEKALTLP-- 873

  Fly   826 PLIAE--HESTLGLQHEVAFNLHLIYRANGNKWKARQYLMRYCVV 868
            ||..|  .:..:.|:.|:|:||.|||:::|||..||..:..||.:
Zfish   874 PLKMEGIEDDQVDLRREIAYNLSLIYQSSGNKDMARHIIYTYCTI 918

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8950NP_001246384.1 TPR repeat 139..164 CDD:276809 13/24 (54%)
TPR repeat 169..198 CDD:276809 15/29 (52%)
TPR repeat 203..231 CDD:276809 9/27 (33%)
TPR 219..497 CDD:223533 92/309 (30%)
TPR repeat 237..264 CDD:276809 6/26 (23%)
TPR repeat 276..304 CDD:276809 5/27 (19%)
TPR repeat 402..430 CDD:276809 11/27 (41%)
TPR repeat 435..467 CDD:276809 16/31 (52%)
TPR_19 448..510 CDD:291240 26/70 (37%)
TPR repeat 472..497 CDD:276809 12/33 (36%)
TPR_12 795..864 CDD:290160 32/70 (46%)
gtf3c3NP_001243171.1 TPR_11 172..234 CDD:290150 34/61 (56%)
TPR repeat 172..197 CDD:276809 13/24 (54%)
TPR repeat 203..231 CDD:276809 13/27 (48%)
TPR repeat 236..266 CDD:276809 11/29 (38%)
TPR_11 238..302 CDD:290150 19/63 (30%)
TPR repeat 271..299 CDD:276809 6/27 (22%)
TPR repeat 310..338 CDD:276809 5/27 (19%)
LcrH_SycD 445..>549 CDD:274197 39/106 (37%)
TPR repeat 458..485 CDD:276809 11/26 (42%)
TPR repeat 490..521 CDD:276809 16/31 (52%)
TPR repeat 526..550 CDD:276809 10/23 (43%)
TPR repeat 842..872 CDD:276809 18/32 (56%)
TPR 844..874 CDD:197478 17/31 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170576373
Domainoid 1 1.000 89 1.000 Domainoid score I7885
eggNOG 1 0.900 - - E1_KOG2076
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H40805
Inparanoid 1 1.050 360 1.000 Inparanoid score I2166
OMA 1 1.010 - - QHG55439
OrthoDB 1 1.010 - - D108764at33208
OrthoFinder 1 1.000 - - FOG0005249
OrthoInspector 1 1.000 - - oto40197
orthoMCL 1 0.900 - - OOG6_103511
Panther 1 1.100 - - LDO PTHR23082
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1326
SonicParanoid 1 1.000 - - X4262
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.840

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