DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8950 and sfc4

DIOPT Version :10

Sequence 1:NP_611184.1 Gene:CG8950 / 36921 FlyBaseID:FBgn0034186 Length:868 Species:Drosophila melanogaster
Sequence 2:NP_587924.1 Gene:sfc4 / 2539187 PomBaseID:SPCC16C4.14C Length:1006 Species:Schizosaccharomyces pombe


Alignment Length:1063 Identity:219/1063 - (20%)
Similarity:393/1063 - (36%) Gaps:266/1063 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 DSDSNEVLIEEIDSNDVPENELEQFQETEPLRVVDIIDCDTDGERRCIADDEEEGALIKRYVQGV 67
            ||:.||...:..|:.|....:|..:       :.:|:|     |.|.:::.:             
pombe    11 DSNMNETQNDTTDNFDAEMQDLNGY-------ISEIVD-----EARNVSEVD------------- 50

  Fly    68 QCLEFPDFCTKLEA----SDE--DEEGNDEEP--SEAAGSIEKPNTSAQAKTSQEQSTG-----S 119
              .:|....:.|:|    |||  |.||:|:|.  |:.|...|....:.:.:.:.:...|     .
pombe    51 --AKFLGDTSALQAEGLWSDEESDYEGSDDESNFSKTASRTEDDIANEEWEENLKAVAGFRKVRK 113

  Fly   120 GRSGGGGFRKSQL--STALQGLMGEANLSFVY-GRYETAERICMEIIR--QNPLASEPFYTLAEI 179
            |..|.|...::.:  |..:|.::..||..|.. |.::.|:::..||:|  .|.:|:  :..|.|.
pombe   114 GHKGRGRVSRADMLPSVEVQQMLSLANHLFAQEGNFDEAQKLAEEIVRIDNNVIAA--WKMLGEC 176

  Fly   180 YENRDE-----VKFLNFSTLAAHLNPQDRDMWIRVSDLLVQQGNLARARLIYTKAIKMLP----- 234
            :..|..     .|.|.....||||.|:|.::|...:.|........:|...|.:|:...|     
pombe   177 HRQRGNGRVNIEKCLIAWMAAAHLKPKDHELWFTCAKLSESLEFWDQADYCYNRAVSAKPPNKSE 241

  Fly   235 -KVY----------QLRLRKA----QLLQKMGETNASMFTYLKMLPLMPPDEWKMCLNTAKNVAR 284
             |.|          ...|:||    :.|.:....|||:   ||.|.     |..:.::..:.:.:
pombe   242 LKKYIWNRSVLNKEHGSLKKAAEGFKFLLQSSPYNASI---LKNLA-----EIYIKIHAPREILK 298

  Fly   285 YFHVLEKHSLALEAMEGAYSVCGARFTLEDINIYLELLILNKQYAKVLRCL---------RERTN 340
            .|.:..|:.....|......:    |.|..:|:|.|||:|:.|::.::|.:         |:..:
pombe   299 QFEIAWKYFYQYPAPPIGNDI----FDLPTLNLYAELLLLDHQWSNLIRLINRGVRWFRGRKSES 359

  Fly   341 F--ELENDQEESLE--LIYFCEIPDDY-------VPEL-RAKLCVSLI---HMRAHHLLGYLIQN 390
            |  |.::|:|..::  ...|....:::       :|.| |.||.::.:   .:....|...:|:|
pombe   360 FWDEFDDDREWDVDERRREFPNASEEHTNKEAYLLPHLFRTKLGIARLKTGELPEAELHFSVIKN 424

  Fly   391 VQEHIT--LTADRVELYMDITE--------ALMQEHKYAEAIALMSPITDGDTVECPAFVWLRQA 445
            :.....  :..|..:.||||..        .|:..|:.|:.|.|                |....
pombe   425 LPPDYAWGMLYDIAKAYMDIERLDLALEYFVLICNHEPAQNIGL----------------WYNMG 473

  Fly   446 ECLRQLNRTNEAIQSYEKV-----------VQLAPF----------------CYDARFTLSALLK 483
            .|..:|.....|.|..|.:           ::||..                .::.|..::.|.:
pombe   474 VCYLELKEYEHAQQCMEAILIVDNSNTNALIKLAEINELQDNRDAALEIVTNIFEQRRNINELER 538

  Fly   484 QQGR---HEEAVQA-------------------LEQPGEAEGQPLI------ARLLYERCVMLQQ 520
            :|.:   ||:.|.:                   :.:..|...|..|      .|..::..::.|.
pombe   539 EQSQNEDHEKNVGSQLFVGNQKVPQDKWEKRARISRSKEEARQFTIWKTEETQRRFHKLDILRQS 603

  Fly   521 IGR-------IEEFLDVGYALLSRH-SIKLYNREEMMAAANGG-----SAYNS--ESLKTIIQMR 570
            :.:       :.|:|.:...|:... |||.:...|..|.|..|     :.|.|  :.|.::|...
pombe   604 LKKEENVSESLNEWLAIASELIDEFVSIKAFFPSEKKARARAGLLTRRTRYASLNDQLTSMINRL 668

  Fly   571 SKAVDNSAEQDLQDPAKNAASETSDLTVKDEFELFRELVRTAFKHG--------MHSAAEKICFA 627
            :.::..:...||............::::...::||.|......|.|        :.:|...|.|.
pombe   669 NDSLTRTKYGDLDLDTILRTGYFRNVSIDAWYQLFVEFSLRLTKVGSVQQAYDVLTTAMGAILFD 733

  Fly   628 MVTTKRFTYYHHEIERIMVLTCYYNDDCAIAFSYLRELIAKQPSQTTLWNMLSLMIQKGDE---- 688
            ..|.||     ..:...|:....|..|...|.:.||.:......:...:.:.|.::.:|.|    
pombe   734 QDTIKR-----QNLRWCMLACSMYARDPQGALTPLRWVFTTFQFRQDTYRLFSAVLSQGYECSRA 793

  Fly   689 ----------VRYYRYMRRLMQRH------------------PVDTKPMRI-FQGHYHLNCASFK 724
                      :|..:.|.:||...                  |....|:.: ..||......|:.
pombe   794 FVDSANQKFLLRLIKLMDQLMSNSLVSGAATLVKNDDGLATVPTSYDPVLVLLYGHIMARNRSWI 858

  Fly   725 YALNIYMPILRENPD-PLVALCIAVAFNQLSLQKKVLRKSASVAQAVAFGQRYKELRSAGHELAD 788
            .|:|.|......||| |:..|.:.:|:...::|:....:...:.|...|..||.:|| ....|.:
pombe   859 PAINYYSRAFAINPDCPITNLSLGLAYLHRAMQRLSDNRHYQILQGFTFLYRYYDLR-VNEGLGE 922

  Fly   789 CAAQQEIFYNIGRIYHQANILHLAVDYYEKALAVPVHPL-----IAEHESTLGLQH----EVAFN 844
               :||..||:|:.||...:.|.||.|||..|.  :.|:     :...|||:...:    |.|:|
pombe   923 ---KQEALYNLGKAYHFIGLEHYAVKYYEAVLG--LSPMSQGDKMTSSESTVSTTYDFGFEAAYN 982

  Fly   845 LHLIYRANGNKWKARQYLMRYCV 867
            |.|||..:||...|.|...:|.:
pombe   983 LRLIYICSGNIKLAFQISSKYLI 1005

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8950NP_611184.1 BepA 133..268 CDD:443813 41/162 (25%)
TPR repeat 139..164 CDD:276809 7/25 (28%)
TPR repeat 169..198 CDD:276809 8/33 (24%)
TPR repeat 203..231 CDD:276809 5/27 (19%)
TPR repeat 237..264 CDD:276809 10/40 (25%)
Spy 318..>515 CDD:443119 49/285 (17%)
TPR repeat 402..430 CDD:276809 9/35 (26%)
TPR repeat 435..467 CDD:276809 6/42 (14%)
LapB 438..702 CDD:442196 59/355 (17%)
TPR repeat 472..497 CDD:276809 6/46 (13%)
sfc4NP_587924.1 TPR repeat 132..161 CDD:276809 8/28 (29%)
TPR 142..>306 CDD:440225 39/173 (23%)
TPR repeat 166..200 CDD:276809 8/35 (23%)
TPR repeat 205..233 CDD:276809 5/27 (19%)
TPR repeat 243..271 CDD:276809 6/27 (22%)
TPR 402..600 CDD:440225 32/213 (15%)
TPR repeat 434..459 CDD:276809 6/24 (25%)
TPR repeat 465..495 CDD:276809 8/45 (18%)

Return to query results.
Submit another query.