DRSC/TRiP Functional Genomics Resources

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Protein Alignment fat-spondin and spon1a

DIOPT Version :9

Sequence 1:NP_477435.1 Gene:fat-spondin / 36919 FlyBaseID:FBgn0026721 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_571590.1 Gene:spon1a / 58027 ZFINID:ZDB-GENE-000427-9 Length:808 Species:Danio rerio


Alignment Length:817 Identity:254/817 - (31%)
Similarity:358/817 - (43%) Gaps:207/817 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 WLTISMVTACPRAPTHLNHGRRTRGDNGYKLIVADGPNGYVPGKTYNLLLLGSRTHLKVQHFTHF 80
            |:|        ||..|...||| ...:.::|.|...|..|.||.||.:.|..:..    .:|..|
Zfish    42 WIT--------RAQPHGAGGRR-ESTSEFRLRVEGDPEHYQPGSTYRVTLYATNP----AYFRGF 93

  Fly    81 TITA--EAHTGARRPQAASPRRVGRFQLFSDSLTQFNDRCVNTVSEADDLPKTEVQVMWVAPESG 143
            |:.|  |.|.|.:....|     |.||:..:..|||...|...|:|:....:|.:||.|.||.||
Zfish    94 TLIALKEGHNGDQEEDYA-----GNFQIIDEEDTQFMTSCPPAVTESTPRRRTRIQVFWTAPPSG 153

  Fly   144 SGCVSLSAMVYEGPRAWFADDGNLSTVICER---------KPDAAAAQKECCACDEAKYSFVFEG 199
            .|||.|.|.:.:.....|.|:|:|:..:||:         ||     ..:||||..|||...|.|
Zfish   154 HGCVLLKASIVQRKIISFQDEGSLTKRMCEKESLYGETTDKP-----LLDCCACGTAKYRVTFYG 213

  Fly   200 IWSNETHPKDYPFAIWLTHFSDVIGASHESNFSFWGENHIATAGFRSLAEWGSPAALETELRANG 264
            .||.:.||||||..  ..|:|.:|||||..|:..|.....|:.|.:.:||.|||..:|.|:|..|
Zfish   214 NWSEKLHPKDYPRR--ANHWSALIGASHSKNYILWEYGGYASEGVKQVAELGSPVKMEEEIRQKG 276

  Fly   265 PKLRTLIKAAG---LWYP-NVNQNTSSKFRVDRKHPKVSLVSMFGPSPDWVVGISGLDLCTEDCS 325
            .::.|:||...   .|.| ||....|::|.|||....:|.::|.||||||.||:|..||||.:|.
Zfish   277 DEVLTVIKMKAQWPAWQPLNVRAAPSAEFSVDRTRHLMSFLTMLGPSPDWNVGLSSEDLCTRECG 341

  Fly   326 WKESMDFDLFPWDAGTDSGISYMSPNSETQPPERMYRITTMYPEDPRAPFYNPKSREMTPLAKLY 390
            |.:.:..||.|||||||||:||.|||..|.|.|::..:|::  :.|::|||:|:...:||:|:|.
Zfish   342 WVQKVVQDLIPWDAGTDSGVSYESPNKSTAPQEKIRPLTSL--DHPQSPFYDPEGGAITPVARLV 404

  Fly   391 LRRE-------KIVSRNCDDEFLQALQLEVSDDAEEQDTRAECRVGDYSAWSPCSVS-CGKGIRM 447
            :.|.       .||..|.||......|    ::.||.||...|...::|.||.||.| |.||.||
Zfish   405 VERIARKGEQCNIVPDNVDDIVADIAQ----EEKEEDDTPETCIYSNWSPWSACSSSTCEKGKRM 465

  Fly   448 RSRQY-------------------LYPAAADQN-----------------KCARQLVAKEMCVAA 476
            |.|..                   :.|..:|::                 .|...|.::|..|..
Zfish   466 RQRMLKAQLDLSVPCPHTQDFEPCIGPGCSDEDSSTCMMSEWITWSPCSVSCGSGLRSRERYVKQ 530

  Fly   477 IPECADGPAQSKDRDDDE----GENLANSQSLVGSNGEGAGLCKTSPWSVWSECSASCGIGITMR 537
            .|:  ||.|.:...::.|    .|..::|.            |..:.|..|..|||:||:|:..|
Zfish   531 FPD--DGFACTHPTEETEPCTVNEECSSSS------------CLVTEWGEWDACSATCGLGMKRR 581

  Fly   538 TRTFVNHLGRKRCPH------ITIVEKNKCMRPDCTYEQVELPDPQCPTSQWSDWSPCSSTCGRG 596
            .|..      |..|.      ..:||..|||.|:|.    .:|   |..|.|||||.||.|||:|
Zfish   582 ERMV------KMPPSDGSICGAEVVEVEKCMMPECH----TIP---CLLSPWSDWSDCSVTCGKG 633

  Fly   597 VTIRTRLLLLENGPDKESCTQRMELHQQKECVNPIDCHINAEQAKDICVQAPDPGPCRGTYMRYA 661
            ..:|.|  :|::..:...|.:  :|.|.::|:.|                               
Zfish   634 TRVRQR--MLKSAVELGECNE--DLEQMEKCMLP------------------------------- 663

  Fly   662 YDPQNQHCYSFTYGGCRGNRNNFLTENDCLNTCNVLRSPYSSRVDQPRACVLSDWSVWSPCSVSC 726
                                       :|                 |..|::|:||.||.||.||
Zfish   664 ---------------------------EC-----------------PMDCIMSEWSEWSECSKSC 684

  Fly   727 GVGVSESRRYVVTEPQNGGQPCSKRLVKSRSCAMPAC 763
            |.|.....|.:..|||.||.||.: :.:.::|.:..|
Zfish   685 GKGHLLRTRMITLEPQFGGDPCPE-VTQRKTCKIKKC 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fat-spondinNP_477435.1 Reeler 24..172 CDD:260081 49/149 (33%)
Spond_N 191..378 CDD:283999 86/190 (45%)
TSP1 428..473 CDD:214559 18/81 (22%)
TSP1 518..566 CDD:214559 18/53 (34%)
TSP1 581..627 CDD:214559 18/45 (40%)
Kunitz_BPTI 643..694 CDD:278443 1/50 (2%)
TSP1 714..763 CDD:214559 20/48 (42%)
spon1aNP_571590.1 Reeler 49..182 CDD:260081 47/142 (33%)
Spond_N 205..392 CDD:283999 86/190 (45%)
TSP_1 446..494 CDD:278517 14/47 (30%)
TSP_1 505..554 CDD:278517 10/50 (20%)
TSP_1 562..610 CDD:278517 18/53 (34%)
TSP_1 618..665 CDD:278517 20/108 (19%)
TSP_1 672..720 CDD:278517 20/48 (42%)
TSP_1 761..808 CDD:278517
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 186 1.000 Domainoid score I3283
eggNOG 1 0.900 - - E1_KOG3539
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 381 1.000 Inparanoid score I2015
OMA 1 1.010 - - QHG46443
OrthoDB 1 1.010 - - D240419at33208
OrthoFinder 1 1.000 - - FOG0003147
OrthoInspector 1 1.000 - - mtm6609
orthoMCL 1 0.900 - - OOG6_104958
Panther 1 1.100 - - O PTHR11311
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2543
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.840

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