Sequence 1: | NP_477435.1 | Gene: | fat-spondin / 36919 | FlyBaseID: | FBgn0026721 | Length: | 763 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001007017.1 | Gene: | Sspo / 474348 | RGDID: | 1549716 | Length: | 5141 | Species: | Rattus norvegicus |
Alignment Length: | 784 | Identity: | 157/784 - (20%) |
---|---|---|---|
Similarity: | 247/784 - (31%) | Gaps: | 313/784 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 132 EVQVMW-------VAPESGSGCVSLSAMVYEGPRAWFADDG--------NLSTVICERKPDAAAA 181
Fly 182 Q---KECCACD---EAKYSFVFEGIWSNETHPKDYPFAIWLTHFSDVIGASHESNFSFW------ 234
Fly 235 -----------GENHIATAGFRSLAEWGSPAALETE----------LRAN-GPKLRTLIKAAGLW 277
Fly 278 YPNVNQNTSSKFRVDRKHPKVSLVSM-------------FGPSP---DWVVGISGLDLCTEDCSW 326
Fly 327 KESMDFDLFPWDAGTDSGISYMSPNSETQPPERMYRITTMYPED--PRAPFYNPKSREMTPLAKL 389
Fly 390 -----------YLRREKIVSRNCDDEFLQALQLEVSDDAEEQD-------------------TRA 424
Fly 425 ECRVGDYSAWSPCSVSCGKGIRMRSRQYLYPAAADQNKCARQLVAKEMCVAAIPECADGPAQSKD 489
Fly 490 RDD--DEGENLANSQSLVGSNGEGAGLCKTSPWSVWSECSASCGIGITMRTRTFVNHLGRKRCPH 552
Fly 553 ITIVEKNKCMRP-----DCTYEQVELPDP----QCPT----SQWSDWSPCSSTCGRGVTIRTRLL 604
Fly 605 L---LEN------GPDKESCTQRMELHQQKECVNPIDC-----HINAEQAKDICVQA---PDPGP 652
Fly 653 CRGTYMRYAYDPQ-NQHCYSFTYGGCRGNRNNFLTENDC----------------------LNTC 694
Fly 695 NVLRSPYSSRVDQPRACVLS-DWSVWSP---CSVSCGVGVSESRRYVVTEPQN-GGQPCSKRLVK 754
Fly 755 SRSC 758 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
fat-spondin | NP_477435.1 | Reeler | 24..172 | CDD:260081 | 9/54 (17%) |
Spond_N | 191..378 | CDD:283999 | 37/232 (16%) | ||
TSP1 | 428..473 | CDD:214559 | 8/44 (18%) | ||
TSP1 | 518..566 | CDD:214559 | 14/52 (27%) | ||
TSP1 | 581..627 | CDD:214559 | 15/54 (28%) | ||
Kunitz_BPTI | 643..694 | CDD:278443 | 15/76 (20%) | ||
TSP1 | 714..763 | CDD:214559 | 19/50 (38%) | ||
Sspo | NP_001007017.1 | VWD | 192..341 | CDD:214566 | |
C8 | 393..468 | CDD:285899 | |||
TIL | 472..527 | CDD:280072 | |||
VWD | 556..716 | CDD:214566 | |||
C8 | 769..826 | CDD:285899 | |||
TIL | 830..883 | CDD:280072 | |||
VWD | 1019..1168 | CDD:278521 | |||
C8 | 1206..1276 | CDD:285899 | |||
TIL | 1280..1336 | CDD:280072 | |||
LDLa | 1381..1416 | CDD:238060 | |||
LDLa | 1421..1455 | CDD:238060 | |||
LDLa | 1457..1491 | CDD:238060 | |||
LDLa | 1497..1528 | CDD:197566 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1533..1567 | ||||
Ldl_recept_a | 1568..1604 | CDD:278486 | |||
TSP1 | 1702..1753 | CDD:214559 | |||
TSP1 | 1758..1812 | CDD:214559 | |||
TIL | 1822..1873 | CDD:280072 | |||
TSP1 | 1917..1970 | CDD:214559 | |||
FA58C | 2070..2226 | CDD:214572 | 19/128 (15%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2087..2109 | ||||
FA58C | <2111..2225 | CDD:238014 | 19/127 (15%) | ||
LDLa | 2236..2270 | CDD:238060 | 6/33 (18%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2262..2335 | 14/80 (18%) | |||
LDLa | 2392..2426 | CDD:238060 | 6/43 (14%) | ||
LDLa | 2449..2483 | CDD:238060 | 14/66 (21%) | ||
TSP1 | 2490..2538 | CDD:214559 | 17/68 (25%) | ||
TSP1 | 2543..2595 | CDD:214559 | 15/56 (27%) | ||
TIL | 2618..2660 | CDD:280072 | 13/49 (27%) | ||
TSP1 | 2703..2752 | CDD:214559 | 18/47 (38%) | ||
TSP1 | 2760..2813 | CDD:214559 | |||
TSP_1 | 2819..2867 | CDD:278517 | |||
TIL | 2871..2930 | CDD:280072 | |||
VWC_out | 2932..2979 | CDD:214565 | |||
TSP1 | 2972..3023 | CDD:214559 | |||
TIL | 3075..3127 | CDD:280072 | |||
TSP1 | 3240..3292 | CDD:214559 | |||
TIL | 3300..3350 | CDD:280072 | |||
TSP1 | 3396..3439 | CDD:214559 | |||
TSP1 | 3460..3504 | CDD:214559 | |||
TIL | 3514..3570 | CDD:280072 | |||
TSP1 | 3633..3677 | CDD:214559 | |||
TSP1 | 3810..3862 | CDD:214559 | |||
TSP1 | 3879..3927 | CDD:214559 | |||
TSP1 | 3945..3998 | CDD:214559 | |||
TSP1 | 4003..4055 | CDD:214559 | |||
TIL | 4058..4113 | CDD:280072 | |||
TSP1 | 4158..4208 | CDD:214559 | |||
TSP1 | 4252..4303 | CDD:214559 | |||
TSP1 | 4367..4418 | CDD:214559 | |||
TIL | 4422..4477 | CDD:280072 | |||
TSP1 | 4611..4659 | CDD:214559 | |||
TIL | 4673..4719 | CDD:280072 | |||
TSP1 | 4763..4812 | CDD:214559 | |||
TIL | 4814..4868 | CDD:280072 | |||
TIL | 4920..4978 | CDD:280072 | |||
VWC | 4980..5035 | CDD:302663 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |