DRSC/TRiP Functional Genomics Resources

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Protein Alignment fat-spondin and mspo

DIOPT Version :10

Sequence 1:NP_477435.1 Gene:fat-spondin / 36919 FlyBaseID:FBgn0026721 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_725407.1 Gene:mspo / 36632 FlyBaseID:FBgn0020269 Length:601 Species:Drosophila melanogaster


Alignment Length:540 Identity:128/540 - (23%)
Similarity:204/540 - (37%) Gaps:138/540 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 WFADD----GNLS-TVICERKPDAAAAQKECCACDE-AKYSFVFEGIWSNETHPKDYPFAIWLTH 218
            ::.||    .||: |......|....|.:..|..|. |.|..|....|:.|..||.||.......
  Fly    83 YYTDDPSPVSNLNPTASLATPPATQPAPQTGCTLDRLAVYKVVLHTYWTRELFPKHYPDWRPTAQ 147

  Fly   219 FSDVIGASHESNFSFWGENHIATAGFRSLAEWGSPAALET---ELRANGPKLRTLIKAAGLWYPN 280
            ::..:|.:|.:|::.:.....|||..:..||.|....|::   |.:....:|::.::|.......
  Fly   148 WTKTLGRTHNANYALYHIGQPATAAVKQFAESGRTDLLDSNAGEQQQVQMQLQSQMQAGKSPSGG 212

  Fly   281 VNQNTSS------------------------------------------------------KFRV 291
            ::..|:|                                                      |..|
  Fly   213 ISSGTTSFNATAASTATPTGGSGGSGGSGGSGGTGTTTAERSVFDEFSMPAIPMGAGRSEAKVFV 277

  Fly   292 DRKHPKVSLVSMFGPSPDWVVGISGLDLCTEDCSWKESMDFDLFPWDAGTDSGISYMSPNSETQP 356
            |..|..|||::...|||||.:|:...:||... ||.:::..:|.|.|||||:|.::.:||..|:|
  Fly   278 DSNHSLVSLMTRIVPSPDWFIGVDSFELCVGG-SWIDTVTVELDPLDAGTDNGFTFTAPNWPTEP 341

  Fly   357 PERMYRITTMYPEDPRAPFYNPKSREMTPLAKLYLRREK------IVSRNCDDEFLQALQLEVSD 415
            ...:||||:.||..|...||.|||:.:.|:|.....:.|      :.:...||...:.:|.:...
  Fly   342 QGVIYRITSRYPGHPAGSFYYPKSKRLPPIATFQFIKLKEYELSEVFNIAEDDRKYETVQTQTHL 406

  Fly   416 DAEEQDTRAECRVGDYSAWSPCSVSCGKGIRMRSRQYLYPAAADQNKCARQLVAK---------- 470
            |||.......         :..|.|..:. |...:|.|.....::.:...||:||          
  Fly   407 DAEHNHVEMN---------NELSASIERE-RQTEQQQLQQNDDERQRIRSQLLAKMNPIYGSNNS 461

  Fly   471 -----EMCVAAIPE-----CADGPAQSKDRDDDEGENLAN--SQSLVGSNGEGAGL--------- 514
                 ...|:.:|:     .....|.|..|..|..:..|:  :.|.:|....|..:         
  Fly   462 LQPAPGQVVSVVPKNDKHAILQSIASSYRRAADASDANASKPTPSAIGGGKAGGAVGGGAATRRR 526

  Fly   515 --------CKTSPWSVWSECSASCGIGITMRTRTFVNH--LGRKRCPHITIVEKNKCMRPDCTYE 569
                    |:.|.||.|:.||.|||:|...|.|..:.|  .|.::||   .::::|.    |..|
  Fly   527 SSAQRRRDCRVSHWSEWTACSKSCGVGEMHRYRKVIKHGKRGGRQCP---ALQQSKW----CGTE 584

  Fly   570 QVELPDPQCPTSQ----WSD 585
            :      .|..||    |||
  Fly   585 R------NCHGSQTYFNWSD 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fat-spondinNP_477435.1 Reeler 24..172 CDD:260081 5/16 (31%)
Spond_N 191..385 CDD:461924 65/250 (26%)
PTZ00441 <419..>497 CDD:240420 15/97 (15%)
TSP1_spondin 426..>463 CDD:480609 5/36 (14%)
TSP1_spondin 515..566 CDD:480609 18/52 (35%)
TSP1_spondin 578..630 CDD:480609 6/12 (50%)
Kunitz-type 644..695 CDD:444694
TSP1_spondin 711..763 CDD:465948
mspoNP_725407.1 Spond_N 120..370 CDD:461924 65/250 (26%)
TSP1_spondin 535..587 CDD:465948 20/64 (31%)
Blue background indicates that the domain is not in the aligned region.

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