DRSC/TRiP Functional Genomics Resources

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Protein Alignment fat-spondin and spon2b

DIOPT Version :9

Sequence 1:NP_477435.1 Gene:fat-spondin / 36919 FlyBaseID:FBgn0026721 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_571083.4 Gene:spon2b / 30202 ZFINID:ZDB-GENE-990415-161 Length:331 Species:Danio rerio


Alignment Length:300 Identity:98/300 - (32%)
Similarity:152/300 - (50%) Gaps:17/300 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   185 CCACDEAKYSFVFEGIWSNETHPKDYPFAIWLTHFSDVIGASHESNFSFWGENHIATAGFRSLAE 249
            |.|...|||...|.|.|:....||.||.......:|.:||.:|.|::..|..|..|:.|.|..:|
Zfish    34 CTAPSTAKYRLTFTGQWTQTAFPKHYPLYRPPAQWSPLIGVTHSSDYHLWQRNEYASNGVREFSE 98

  Fly   250 WGSPAALETELRANGPKLRTLIKAAGLW-YPNVNQNT---SSKFRVDRKHPKVSLVSMFGPSPDW 310
            ......|..|:.|.|.:::::.   ||: .|.|...|   :::|.|..:|..:|.:....|||||
Zfish    99 RAEAWTLIKEVEAAGERIQSVY---GLFSAPAVVAGTGHATTEFEVFARHSLLSFIVRIVPSPDW 160

  Fly   311 VVGISGLDLCTEDCSWKESMDFDLFPWDAGTDSGISYMSPNSETQPPERMYRITTMYPEDPRAPF 375
            .:|:..|:||..| .|||::..:|:|:|||||||.::.|||.||.|.:::.:||:.:|..|...|
Zfish   161 FIGVDSLNLCEGD-HWKENISLELYPYDAGTDSGFTFSSPNFETIPQDKVTQITSSFPSHPANSF 224

  Fly   376 YNPKSREMTPLAKLYLRREKIVSRNCDDEFLQALQLEVSDDAEEQD-----TRAECRVGDYSAWS 435
            |.|:.:.:.|:||:.|  .||.:.......:|..|........|.|     |..:|.|..:|.|.
Zfish   225 YYPRLKHLPPIAKVSL--TKIKNNQIFSLPIQPTQSNQIPSGNEIDGPLINTPLDCEVSVWSPWG 287

  Fly   436 PCSVSCG-KGIRMRSRQYLYPAAADQNKCARQLVAKEMCV 474
            .|...|| ||::.|:| |::...|:.......|..|.:|:
Zfish   288 LCKGQCGEKGVKHRTR-YIHTHPANNGAPCPSLEEKRLCI 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fat-spondinNP_477435.1 Reeler 24..172 CDD:260081
Spond_N 191..378 CDD:283999 68/190 (36%)
TSP1 428..473 CDD:214559 14/45 (31%)
TSP1 518..566 CDD:214559
TSP1 581..627 CDD:214559
Kunitz_BPTI 643..694 CDD:278443
TSP1 714..763 CDD:214559
spon2bNP_571083.4 Spond_N 40..227 CDD:283999 68/190 (36%)
TSP1 280..330 CDD:214559 15/47 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D240419at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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