DRSC/TRiP Functional Genomics Resources

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Protein Alignment fat-spondin and spon-1

DIOPT Version :9

Sequence 1:NP_477435.1 Gene:fat-spondin / 36919 FlyBaseID:FBgn0026721 Length:763 Species:Drosophila melanogaster
Sequence 2:NP_495473.2 Gene:spon-1 / 174169 WormBaseID:WBGene00006893 Length:819 Species:Caenorhabditis elegans


Alignment Length:803 Identity:293/803 - (36%)
Similarity:408/803 - (50%) Gaps:103/803 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IRLIVVIWLTISMVTACPRAPTHLNHGRRTRGDNGYKLIV-------ADGPNGYVPGKTYNLLLL 66
            |.|:::|:...:....|...|.... |.::.|.|||.:.:       .|...|:|||:.|.:.:.
 Worm    11 ILLLLLIFSCNADEAKCTIKPYEAK-GDKSPGSNGYVIEINGTTTKSMDISKGFVPGEIYKVSIR 74

  Fly    67 GSRTHLKVQHFTHFTITA--EAHTGARRPQAASPRRVGRFQLFSDSLTQFNDRCVNTVSEADDLP 129
            |.||...|:.|..|.:::  |.:|.|...|........|   .|....|      :.||.|:...
 Worm    75 GWRTQYTVKTFRGFVVSSLFEDNTSAGSWQVVKGHGDAR---ISPGCRQ------SGVSHANLKS 130

  Fly   130 KTEVQVMWVAPESGSGCVSLSAMVYEGPRAWFADDGNLSTVICERK--------PDAAAAQKECC 186
            ||.|.:||.|||..||||...|.|.|....||.:...|:..:|.:|        .|.:|.   ||
 Worm   131 KTSVHMMWKAPEVSSGCVVFRASVIETKYIWFTEAEGLTVKLCIQKGTQILKPVDDPSAT---CC 192

  Fly   187 ACDEAKYSFVFEGIWSNETHPKDYPFAIWLTHFSDVIGASHESNFSFWGENHIATAGFRSLAEWG 251
            |||.|:|...|.||||..|||||||....||||:|::|:||.||:|.|....|:|.|.:.:||||
 Worm   193 ACDIAQYDLEFTGIWSKNTHPKDYPTLEHLTHFTDMLGSSHSSNYSLWTIGGISTDGMKEIAEWG 257

  Fly   252 SPAALETELRANGPKLRTLIKAAGLWYPNVNQNTSSKFRVDRKHPKVSLVSMFGPSPDWVVGISG 316
            :....|.|.:|...::|:|:|..|||:|:|...|.|:|.|::.|..|||.:||||||||.||:|.
 Worm   258 NTYKAEAEAKAKASEVRSLMKVKGLWFPDVQGTTKSQFVVNKYHHFVSLATMFGPSPDWCVGLSS 322

  Fly   317 LDLCTEDCSWKESMDFDLFPWDAGTDSGISYMSPNSETQPPERMYRITTMYPEDPRAPFYNPKSR 381
            ::||..||:|.|...|:|.|:|||||||.:|||||..|:|.|.::.|||..  :|.:||||.||.
 Worm   323 VNLCLPDCTWAEERTFELQPFDAGTDSGPTYMSPNEPTEPREPIHWITTKL--NPLSPFYNSKSD 385

  Fly   382 EMTPLAKLYLRREKIVSRNC-DDEFLQALQLEVSDDAEEQD--TRAECRVGDYSAWSPCSVSCGK 443
            .:..|||:.|||:.:.|..| .|:.|:|....:::.:|:::  .|.||.:..:..||.||.:|||
 Worm   386 TIPTLAKVILRRKNVTSSECKSDDILKAEAHNITNTSEDEEYKDRRECMMTQWEPWSLCSATCGK 450

  Fly   444 GIRMRSRQYLYPAAADQNKCARQLVAKEMCVAAIPECADGPAQSKDRDDDEGENLANSQSLVGSN 508
            |||:|||.|::|..|....|.||...|:.|.|.|.||.:..|.|..                   
 Worm   451 GIRIRSRVYVFPIKAQVFHCHRQTTEKQFCNAKINECENSEAFSSK------------------- 496

  Fly   509 GEGAGLCKTSPWSVWSECSASCGIGITMRTRTFVNHLGRKRCPHITIVEKNKCM---RPDCTYEQ 570
                  |:.|.|..|.|||..||.|:..|.|||:|...:.....:.:..|:.|:   ..||..  
 Worm   497 ------CQVSSWGSWGECSVQCGHGMRSRNRTFLNPATKSGDCSVDLERKDICVGENGDDCNV-- 553

  Fly   571 VELPDPQCPTSQWSDWSPCSSTCGRGVTIRTRLLLLENGPDKESCTQRMELHQQKECVNPIDC-- 633
              .|||.|.|:.||||||||::|..||.:||||....   :.|.....:.|.::..||.. .|  
 Worm   554 --TPDPLCKTTAWSDWSPCSASCDEGVRVRTRLFFYS---EHEKRCMHVNLQEKDTCVMQ-SCRR 612

  Fly   634 --HINAEQAKDICVQAPDPGPCRGTYMRYAYDPQNQHCYSFTYGGCRGNRNNFLTENDCLNTC-- 694
              .||:|   :||.:....|.|.|.:.||.|:.:...|..|.:.||:||||.|.||.:|...|  
 Worm   613 FIEINSE---EICQEDKQAGQCAGNFPRYWYNHEKTQCERFIFTGCKGNRNQFETEEECKQICLP 674

  Fly   695 -----------NVLRSPYSS--------RVDQPRACVLSDWSVWSPCSVSCGVGVSESRRYVVTE 740
                       |.|...:.:        |||    |.:|.|:.|..||||||.|.....|:||..
 Worm   675 GYEKSKSLIPNNQLLEDFGNTEVDDGGERVD----CEVSKWTAWGSCSVSCGRGKKSRSRHVVKL 735

  Fly   741 PQNGGQPCSKRLVKSRSCAMPAC 763
            .:|||..||:.|::...|.:..|
 Worm   736 ARNGGHQCSEHLMQELQCRLRPC 758

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fat-spondinNP_477435.1 Reeler 24..172 CDD:260081 47/156 (30%)
Spond_N 191..378 CDD:283999 94/186 (51%)
TSP1 428..473 CDD:214559 20/44 (45%)
TSP1 518..566 CDD:214559 16/50 (32%)
TSP1 581..627 CDD:214559 17/45 (38%)
Kunitz_BPTI 643..694 CDD:278443 20/50 (40%)
TSP1 714..763 CDD:214559 20/48 (42%)
spon-1NP_495473.2 Reeler 36..171 CDD:260081 45/143 (31%)
Spond_N 197..381 CDD:283999 93/185 (50%)
TSP1 435..481 CDD:214559 20/45 (44%)
TSP1 499..551 CDD:214559 16/51 (31%)
TSP1 562..610 CDD:214559 19/51 (37%)
Kunitz_BPTI 621..672 CDD:278443 20/50 (40%)
TSP1 708..759 CDD:214559 21/51 (41%)
TSP1 766..816 CDD:214559
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 210 1.000 Domainoid score I1641
eggNOG 1 0.900 - - E1_KOG3539
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H43229
Inparanoid 1 1.050 463 1.000 Inparanoid score I865
Isobase 1 0.950 - 0 Normalized mean entropy S5564
OMA 1 1.010 - - QHG46443
OrthoDB 1 1.010 - - D240419at33208
OrthoFinder 1 1.000 - - FOG0003147
OrthoInspector 1 1.000 - - otm14588
orthoMCL 1 0.900 - - OOG6_104958
Panther 1 1.100 - - O PTHR11311
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2543
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1514.790

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