DRSC/TRiP Functional Genomics Resources

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Protein Alignment fat-spondin and thsd7b

DIOPT Version :10

Sequence 1:NP_477435.1 Gene:fat-spondin / 36919 FlyBaseID:FBgn0026721 Length:763 Species:Drosophila melanogaster
Sequence 2:XP_002933997.3 Gene:thsd7b / 100498151 XenbaseID:XB-GENE-6043658 Length:1604 Species:Xenopus tropicalis


Alignment Length:858 Identity:190/858 - (22%)
Similarity:292/858 - (34%) Gaps:312/858 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 GRFQLFSDSLTQFNDRCVNTVSE--ADD--LPKTEVQVMWVAPESGSGCV------------SLS 150
            |::||        |..|.|...:  :||  |....||::...|.| ..||            |.|
 Frog   558 GKYQL--------NTSCENQDGQIVSDDLCLDSPPVQLVCKVPCS-QDCVISEWSDWSPCSHSCS 613

  Fly   151 AMVYEG----PRAWFADDGNLSTVICERKPDAAAAQKECCACDEAKYSFVFEGIWSNETHP---- 207
            :...||    .|:..|:.|.               ..:.|...:|.|.:..    .|| ||    
 Frog   614 SKNSEGKQSRTRSILANPGE---------------GGKACPPSQALYEYRL----CNE-HPCSAF 658

  Fly   208 --KDYPFAIWLTHFSDVIGASHESNFSFWGENHIATAGFRSLAEWGSPAALETELRANGPKLRTL 270
              :..|   |.|..:|.:..:..::.| |.|::...||.:|...:                   .
 Frog   659 YWESTP---WGTCSADPLLTALNTSVS-WKEDNACGAGIQSRKVF-------------------C 700

  Fly   271 IKAAGLWYPNVNQNTSSKFRVDRKHPKVSLVSMFGPSPDWVVGISGLDLCTEDCSWKESMDFDLF 335
            :|:      :|...||      ::.|:.:......|.         |..|..||.      ..||
 Frog   701 VKS------SVGHVTS------KRCPEATRPETIRPC---------LLSCKRDCK------VTLF 738

  Fly   336 -PWDAGTDSGISYMSPNSETQPPERMYRIT-------------TMYPED-----PRAPFYNPKSR 381
             .|   |....|.:..|: |...:..||..             |:|.|.     |....|:.|:.
 Frog   739 SEW---TPCPTSCLLGNA-TSVKQSRYRTVILDAAYGGQECPDTLYEERECEDLPICLNYSWKTN 799

  Fly   382 EMTPLAKL-YLRREKIV--SRNCDDEFLQALQLE-VSDDAEEQD--------------------- 421
            :.:|...: ...|:.||  |.:|... ||:.::. :|||....|                     
 Frog   800 QWSPCVLVPESVRQGIVGGSESCGTG-LQSTEVTCISDDGRPVDMTSCLKWAGLMPPLVQECHLP 863

  Fly   422 TRAECRVGDYSAWSPCSVSCGKGIRMRSRQYLYPAAADQNKCAR----QLVAKEM--CVAAIP-- 478
            .:.:|....:|.::|||..|... |.|.|. |...:..::||..    .|...||  ||..:|  
 Frog   864 CKDDCTFTPWSKFTPCSADCTSS-RTRKRS-LTGRSKKRDKCQNAEVYPLTESEMCPCVTFLPHP 926

  Fly   479 ---------------------------ECADGPAQSKDRDDDEGENLANSQSLVGSNG---EGAG 513
                                       :|.||.........|.|..:.: .||.||:|   |...
 Frog   927 YGNWSDCIIPRAEREQPLGMSKAGDGRQCGDGTRFRASACYDSGGRIVD-PSLCGSSGYIEESCV 990

  Fly   514 L-----CKTSPWSVWSECSASCGIGITMRTRTFVN--HLGRKRCPHITIVEKNKCMRPDCTYEQV 571
            :     ||.|.||.||.||:|||.|:.:|::....  :.|.:.||.:.|  ||:..    .||.|
 Frog   991 IPCPFDCKLSDWSAWSPCSSSCGTGVKIRSKWLKEKPYNGGRPCPKLDI--KNQAQ----VYEAV 1049

  Fly   572 ELPDPQCPTSQW--SDWSPCS-------STCGRGVTI-RTRLLLL-----------------ENG 609
            ...: :|....|  ..||.|.       :.||.|:.| :.|.:.:                 ::|
 Frog  1050 PCYN-ECSEYSWVAEPWSACKLNTEERPAACGHGIQIGKVRCVNVSRDGEGAPVNDSYCQGSQSG 1113

  Fly   610 PDKESCTQRMELHQQKECVN-----------------------PIDCHINAEQAKDICVQAPDPG 651
            |..:.|:    |....|||.                       |:...:|..:    |.:.....
 Frog  1114 PTVQECS----LPCPGECVMSNWGHWSDCTKCDIGTMRTRRRFPLRIPVNGHE----CPEGTQTE 1170

  Fly   652 PCRGTYMRYAYDPQNQHCYSFTY-----GGCR---------GNRNNFLTENDCLNT--------- 693
            |||          .|.:|:.:.|     ..|:         |.:...|   ||:.:         
 Frog  1171 PCR----------LNSNCFHYHYNITEWSTCQLSGDAECGEGLKTRLL---DCIRSDGQSVQTSL 1222

  Fly   694 CNVLRS----PYSSR--VDQPRACVLSDWSVWSPCSVSCGVG--VSESRRYVVTEPQNGGQPCSK 750
            |..:..    |.|.|  |:...||.||:||.||.||.:||||  :..||| ::.:.|..|:||.|
 Frog  1223 CEQMNREKPFPMSIRCLVECAIACQLSEWSDWSQCSQTCGVGGQMVRSRR-LLLQAQGEGRPCPK 1286

  Fly   751 RLVKSRSCAMPAC 763
            :|.:.:||.:..|
 Frog  1287 QLSQYKSCPIYPC 1299

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
fat-spondinNP_477435.1 Reeler 24..172 CDD:260081 22/89 (25%)
Spond_N 191..385 CDD:461924 41/218 (19%)
PTZ00441 <419..>497 CDD:240420 24/133 (18%)
TSP1_spondin 426..>463 CDD:480609 10/36 (28%)
TSP1_spondin 515..566 CDD:480609 20/52 (38%)
TSP1_spondin 578..630 CDD:480609 17/101 (17%)
Kunitz-type 644..695 CDD:444694 12/73 (16%)
TSP1_spondin 711..763 CDD:465948 24/53 (45%)
thsd7bXP_002933997.3 TSP1_ADAMTS 45..95 CDD:465950
TSP1_ADAMTS <137..175 CDD:465950
TSP1_spondin 180..226 CDD:465948
TSP1_spondin 336..387 CDD:465948
TSP1_spondin 480..537 CDD:480609
TSP1_spondin 597..655 CDD:465948 15/77 (19%)
TSP1_ADAMTS 660..727 CDD:465950 16/110 (15%)
TSP1_spondin 733..789 CDD:480609 13/65 (20%)
TSP1_spondin 997..>1037 CDD:465948 17/39 (44%)
TSP1_ADAMTS 1060..1122 CDD:465950 12/65 (18%)
TSP1_spondin 1127..1176 CDD:480609 8/62 (13%)
TSP1_spondin 1246..1299 CDD:465948 24/53 (45%)
TSP1_spondin 1369..1428 CDD:465948
Blue background indicates that the domain is not in the aligned region.

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