DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-6 and SET5

DIOPT Version :10

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_012077.1 Gene:SET5 / 856614 SGDID:S000001250 Length:526 Species:Saccharomyces cerevisiae


Alignment Length:358 Identity:77/358 - (21%)
Similarity:129/358 - (36%) Gaps:116/358 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DFARKCEIK-QNDTLGRFAVALCNVRAGETLLLEN-PIVVLP-------LMGERRCSKC----FN 58
            |...|.|:| .:|..||...|..:...|:.:|.|| |||.:|       :...:.|::|    ::
Yeast   109 DSDAKVEVKFIDDEHGRGLFAKRDFSKGQIILKENKPIVYIPPLDKLFLISNGKACARCGKALYD 173

  Fly    59 LTES-------FCRKCRLLALCEDC-----SDHD--------------------------ERDC- 84
            ||:.       .|..|:.:...|.|     |.|:                          |:.| 
Yeast   174 LTQHKIMVHYLDCEVCKAIWCSEKCKKAHASLHELLYHSWRSNRIDILHAGNWKRFVNYCEKYCF 238

  Fly    85 -------------------------KRLAEMNFSDDQVELLQKKEHTEIQPVLKCLLLREHEETL 124
                                     ::||.::    |.|.::.::.:.|......|    :..|:
Yeast   239 TAAFSVGLIYGSMLLDTTGEVKEQWQKLASIS----QRERIKLRDASGIGSTFSLL----NGTTV 295

  Fly   125 PLYEEMSQMDSQLMTRRGTE-------VWKNYQEHAFTPLDYGGVLAQLRGAADEDLVQGLLGIL 182
            ...||     |...|::|.|       ||:...|.      :.|...:.....|.:....::|..
Yeast   296 HTEEE-----SDNGTKKGVEKNIDDETVWEKCYEL------FCGAFPKASEEIDFEKFLTMIGTF 349

  Fly   183 DINAYEIRAPEVGGAMRGLYRRAGLFAHSCTPNLVI-SIDDEQRIKVYANRFIAAGEILYNCYTN 246
            :||.|..:          :|.......|.|.||..| .:::.:.::::|.:.|..||.:...|.|
Yeast   350 NINQYNGQ----------VYHWISFINHDCEPNAYIEQVEEHEELRLHARKPIKKGEQIRITYVN 404

  Fly   247 VLLGTEERRKILKVGKCFDCSCPRCQDPTELGT 279
            .|.|...||:.|:|...|.|.|.|||:  ||.|
Yeast   405 PLHGVRLRRRELRVNWGFLCQCDRCQN--ELST 435

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 23/86 (27%)
SET5NP_012077.1 SET 114..>147 CDD:394802 11/32 (34%)
SET_SMYD <352..429 CDD:380997 23/86 (27%)

Return to query results.
Submit another query.