DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and ATXR2

DIOPT Version :10

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_188819.2 Gene:ATXR2 / 821736 AraportID:AT3G21820 Length:473 Species:Arabidopsis thaliana


Alignment Length:435 Identity:70/435 - (16%)
Similarity:119/435 - (27%) Gaps:177/435 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 ARKC---EIKQNDTLGRFAVALCNVRAGETLLLENPIVVLPLMGER----RCSKCFNLTES---- 62
            :|:|   |:|.|.|:|:...|.......|.:|.:..:|.:.....:    .||.||....|    
plant    37 SRRCNGIEVKNNGTIGKGVYANSEFDEDELILKDEILVGIQHSSNKVDCLVCSFCFRFIGSIEKQ 101

  Fly    63 -----FCRKCRLLALCEDCSDHDERDCKRLAEMNFSDDQVELLQKKEHTEIQPVLKCLLLRE--- 119
                 :.:...:...|:|.|. :|.:|   .:.|.:::|........:|..:.|:..|:..|   
plant   102 IGRKLYFKNLGVSGCCDDDSS-EEDEC---VKYNGNEEQCGGSSSSHNTLPEGVVSSLMNGEMAL 162

  Fly   120 -HEETLPL----------------YEEMSQMD-------------SQLMTRRG------------ 142
             |.:..||                .|..:..|             |:.::|..            
plant   163 PHTDKFPLPSPLSCPGGCQEAFYCSESCAAADWESSHSLLCTGERSESISREALGEFIKHANDTN 227

  Fly   143 ---------------------------------------TEVWK----NYQEHAF---------T 155
                                                   .|.||    .|:...:         .
plant   228 DIFLLAAKAIAFTILRYRKLKAEHVDKKAKQSEPKQSLLLEAWKPVSIGYKRRWWDCIALPDDVD 292

  Fly   156 PLDYGGVLAQLRGAADEDLVQGLLGILDINAYEIRAPEVGGAMRGLYRRAGL------------- 207
            |.|.|....|::..|...|....:.|.|.....:.:.|:.|.:.|::....|             
plant   293 PTDEGAFRMQIKNLACTSLELLKIAIFDKECEALFSLEIYGNIIGMFELNNLDLVVASPVEDYFL 357

  Fly   208 -------------------------------------------FAHSCTPNLVISIDDEQR---I 226
                                                       ..|||.||......:|.|   .
plant   358 YIDDLPDAEKEETEEITRPFLDALGDEYSDCCQGTAFFPLQSCMNHSCCPNAKAFKREEDRDGQA 422

  Fly   227 KVYANRFIAAGEILYNCYTNVLLGTEERRKILKVGKCFDCSCPRC 271
            .:.|.|.|:..|.:...|.:..|..:||:.:| ....|.|.|.:|
plant   423 VIIALRRISKNEEVTISYIDEELPYKERQALL-ADYGFSCKCSKC 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 23/144 (16%)
ATXR2NP_188819.2 zf-MYND <173..203 CDD:460312 2/29 (7%)
SET_SMYD <380..466 CDD:380997 19/86 (22%)

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