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Protein Alignment SmydA-6 and Smyd3

DIOPT Version :9

Sequence 1:	NP_611182.1	Gene:	SmydA-6 / 36917	FlyBaseID:	FBgn0034183	Length:	498	Species:	Drosophila melanogaster
Sequence 2:	NP_081464.1	Gene:	Smyd3 / 69726	MGIID:	1916976	Length:	428	Species:	Mus musculus

Alignment Length:	470	Identity:	107/470 - (22%)
Similarity:	184/470 - (39%)	Gaps:	102/470 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly    26 ALCNVRAGETLLLENPIVVLPLMGERR--CSKCFNLTESF--CRKCRLLALCE-DCS-----DH- 79
            |:..:|.||.|...:|:......|.|.  |.:|....|..  |.:||:...|. .|.     ||
Mouse    20 AVAPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRIAKYCSAKCQKKAWPDHR 84

  Fly    80 DERDCKRLAEMNFSDDQVELLQKKEHTEIQPVLKCLLLREHEETLPLYEEMSQMDSQLMTRRGTE 144
            .|..|.:..:..:..|.|.||.:        |:..|:..:..|:..||   |..|.:....:.||
Mouse    85 RECSCLKSCKPRYPPDSVRLLGR--------VIVKLMDEKPSESEKLY---SFYDLESNISKLTE 138

  Fly   145 VWK-NYQEHAFTPLDYGGVLAQLRGAA----DEDLVQGLLGILDINAYEIRAPEVGGAMRGLYRR 204
            ..| ..::.|.|...:  :..:::.|:    ..||.:....:: .|::.|...|:.....|||..
Mouse   139 DKKEGLRQLAMTFQHF--MREEIQDASQLPPSFDLFEAFAKVI-CNSFTICNAEMQEVGVGLYPS 200

  Fly   205 AGLFAHSCTPNLVISIDDEQRIKVYANRFIAAGEILYNCYTNVLLGTEERRKILKVGKCFDCSCP 269
            ..|..|||.||..| :.:...:.:.|.|.|.|||.|..||.::|:.:|||||.|:...||:|.|.
Mouse   201 MSLLNHSCDPNCSI-VFNGPHLLLRAVREIEAGEELTICYLDMLMTSEERRKQLRDQYCFECDCI 264

  Fly   270 RCQDPTELGTHMSSFICSQCSCVDGYIVRQPDTGIWQCLLNPEHTLKQEFVSNMLERAKEEIFHA 334
            |||...:....::.                 |..||            :.|...|::.:|...|
Mouse   265 RCQTQDKDADMLTG-----------------DEQIW------------KEVQESLKKIEELKAH- 299

  Fly   335 RDDIYRQELLLAKLSRLLHRNHFLMLDLKQNIASILRQILQ-------NMGTRPNKKVYERKIRL 392
                ::.|.:||....:::.|...:.|:  ||..:  ::|.       |:|      :.|..:..
Mouse   300 ----WKWEQVLALCQAIINSNSNRLPDI--NIYQL--KVLDCAMDACINLG------MLEEALFY 350

  Fly   393 CQEILLVLKVVTPGISRLKAIALYELANTQAELARKMYTE-----------------MEHS-AND 439
            ....:...::..||...::.:.:.::...|  |.:.|:.:                 .||| ..|
Mouse   351 AMRTMEPYRIFFPGSHPVRGVQVMKVGKLQ--LHQGMFPQAMKNLRLAFDIMKVTHGREHSLIED 413

  Fly   440 LLAELERVEVMLRES 454
            |:..||..:..:|.|
Mouse   414 LILLLEECDANIRAS 428

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.