DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and smyd3

DIOPT Version :9

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001032477.1 Gene:smyd3 / 569507 ZFINID:ZDB-GENE-051120-138 Length:380 Species:Danio rerio


Alignment Length:357 Identity:80/357 - (22%)
Similarity:136/357 - (38%) Gaps:65/357 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 ALCNVRAGETLLLENPIV--VLPLMGERRCSKCFNLTESF--CRKCRLLALCE-DCS-----DHD 80
            ||..::.||.:....|..  |.....:..|..|....||.  |.:|:....|. .|.     || 
Zfish    20 ALREIKPGEVIYSCEPFAFCVARDFLKTACQSCLKRGESLSRCSQCKTARYCNVQCQKQAWPDH- 83

  Fly    81 ERDCKRLAEM--NFSDDQVELLQKKEHTEIQPVLKCLLLREHEETLPLYEEMSQMDSQL--MTRR 141
            :|:||.|..:  ....|.|.|:.:        ::..||.:...:...|| .:::..|.|  |:..
Zfish    84 KRECKCLKHLQPRIPTDSVRLVAR--------IIFKLLSQSESDQEELY-SIAEHQSHLADMSEE 139

  Fly   142 GTEVWKNYQEHAFTPL-----DYGGVLAQLRGAADEDLVQGLLGILDINAYEIRAPEVGGAMRGL 201
            .||..|    |..|.|     :....|::|....|.   ..||..:..|.:.|...|:.....||
Zfish   140 KTEGLK----HLCTTLQVYLAEENCDLSRLPSGLDP---VSLLARVTCNCFSISDGELQDVGVGL 197

  Fly   202 YRRAGLFAHSCTPNLVISIDDEQRIKVYANRFIAAGEILYNCYTNVLLGTEERR-----KILKVG 261
            |....|..|.|.||.::..:. :|:.:.|.|.|.:.|.|...||::|..:::||     ::||..
Zfish   198 YPSMSLLNHDCQPNCIMMFEG-KRLTLRAVRVIRSAEELTISYTDILAPSKDRRSQHWDELLKES 261

  Fly   262 KCFDCSCPRCQDPTELGTHMSSFICSQCSCVDGYIVRQPDTGIWQCLLNPEHTLKQEFVSNMLER 326
            :..              .|..|.:....:.   |::|..|..:..|:...::....|:.:..|..
Zfish   262 QAL--------------LHRHSDVVPDRNI---YMLRLLDLAMDACISLDDYETALEYGNRALGP 309

  Fly   327 AKEEIFHARDDIYRQELLLAKLSRLLHRNHFL 358
            .|   .:..|....:.:.|.::.:|   .|||
Zfish   310 YK---LYFSDPHPSRAVELLRVGKL---QHFL 335

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET <179..244 CDD:279228 18/64 (28%)
smyd3NP_001032477.1 zf-MYND 49..87 CDD:280009 11/38 (29%)
SET <201..239 CDD:279228 11/38 (29%)
TPR_12 276..351 CDD:290160 13/69 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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