DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and Smyd5

DIOPT Version :10

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_650955.1 Gene:Smyd5 / 42517 FlyBaseID:FBgn0038869 Length:393 Species:Drosophila melanogaster


Alignment Length:370 Identity:76/370 - (20%)
Similarity:126/370 - (34%) Gaps:108/370 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 EIKQNDTLGRFAVALCNVRAGETLLLENPIVVLPL-----MGERRCSKCFNLTESF--------- 63
            ||::....||..:|..|....|.:..|.|.|....     .|...|..|....|:.         
  Fly     5 EIRELPGKGRAMIATKNFAKDEVIFEEEPFVSRQFSWNVAYGYAACDHCMRPLETVLENVRRLAS 69

  Fly    64 -----------------------CRKCRLLALCEDCSDHDERDCKRLAEMN--FSDD--QVELLQ 101
                                   |.:|::....|||....::...|:|.|.  .|||  .:.:|.
  Fly    70 DPKVEVPLLQHDPTAQWVAQFTQCPRCKVRYCSEDCLMEAQKRYHRVACMGAFHSDDTHPINVLN 134

  Fly   102 ---KKEH-----TEIQPVLKCLLLREHEETLPLYEEMSQMDSQLMTRRGTEVW-----KNYQE-- 151
               ||.|     ..|..:::.:.|.:.......:.|..|....|:..|..:::     :|:::  
  Fly   135 ETWKKMHYPPETGSIMLIVRLMALYQQSTKKEEFLEQLQSFQSLIVNREQKIYHKMLGENFEQQM 199

  Fly   152 --------HAF---------TPLDYGGVLAQL----RGAADEDLVQGLLGILDINAYEIRAPEVG 195
                    :||         ||..:..::|.|    :|.|...|.|.:..:.|:...:....::.
  Fly   200 EQLYLAFCNAFTGEEFSIFKTPDAFKTLMAILGTNSQGIATSVLSQWVAKVSDLPLTDSEKEQLD 264

  Fly   196 GAMRGLYRRAGLFA-------------------HSCTPNLVISI---DDEQRIKVYANRFIAAGE 238
            ..:.|||.:.|.||                   |||.||...:.   :|...:|..|.  |..||
  Fly   265 TVIDGLYAKVGEFAGEFLNNEGSGLYLLQSKINHSCVPNACSTFPYSNDIVVLKALAP--IQQGE 327

  Fly   239 ILYNCYTNVLL---GTEERRKILKVGKCFDCSCPRCQ----DPTE 276
            .:...|.:..:   ....|.|:|:....|.|.||:|:    ||.|
  Fly   328 EICISYLDECMLERSRHSRHKVLRENYVFICQCPKCRAQASDPDE 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 25/110 (23%)
Smyd5NP_650955.1 SET_SMYD5 3..366 CDD:380919 73/362 (20%)
zf-MYND 87..118 CDD:460312 6/30 (20%)

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