DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and SmydA-7

DIOPT Version :10

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_611181.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster


Alignment Length:519 Identity:163/519 - (31%)
Similarity:260/519 - (50%) Gaps:76/519 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 DFARKCEIKQNDTLGRFAVALCNVRAGETLLLENPIVVLP--LMGERRCSKCFNLTESFCRKCRL 69
            :|....:...::.|||..||...:..|:|:|.|.|::|.|  ...:.:|::|...:...||:|::
  Fly     3 EFGENIQHAHDEKLGRHLVASIAIEPGDTILEERPLLVAPHWECHQLKCAQCLQESYVICRRCQV 67

  Fly    70 LALCEDCSDHDERD------------CKRLAEMNFSDDQVELLQKKEHTEIQPVLKCLLLREHEE 122
            ..||.||:.|||.:            ||.:...||.              |..:||.|||.|:..
  Fly    68 FPLCMDCNQHDEFECEFFTSGAGKALCKDILVKNFG--------------ICGLLKLLLLLENPR 118

  Fly   123 TLPLYEEMSQMDSQLMT---------RRGTEVWKNYQEHAFTPLDYGGVLAQLRGAADEDLVQGL 178
            |        :.|.|::.         |.|..:|:.::|....||...|:...|   ..::|....
  Fly   119 T--------KGDCQMLIDVPINLSDYRDGEGMWQEHEELVVRPLMESGLADVL---PTQELTSDA 172

  Fly   179 LGI----LDINAYEIRAPEVGGAMRGLYRRAGLFAHSCTPNLVISIDDEQRIKVYANRFIAAGEI 239
            |..    :|.|::|:.|.: |..::|::.......|.|.||.|:::|::..:|:||...:..|:|
  Fly   173 LHAHCIRIDSNSFEVTAKD-GDTLKGIFVWGATLPHHCVPNTVVALDEQFNMKLYAAVPLQPGDI 236

  Fly   240 LYNCYTNVLLGTEERRKILKVGKCFDCSCPRCQDPTELGTHMSSFICSQCSCVDGYIVRQPDT-- 302
            :||.|||.|:||.:|:..|::.:..:|.|.||.||||:||||||..|.:|   .|:.|.:.|:  
  Fly   237 IYNSYTNPLMGTSQRQHQLRLSRRLECICSRCLDPTEMGTHMSSLKCKEC---PGFSVCEIDSNG 298

  Fly   303 --GIWQC-----LLNPE--HTLKQEFVSNMLERAKEEIFHARDDIYRQELLLAKLSRLLHRNHFL 358
              |.|:|     ||...  |.|:....|.:::        |..|:...|.||.:...|||.|||:
  Fly   299 KLGDWRCPDCRALLTAAEVHELQAAVGSALVD--------AMGDLQVYEALLTQYGPLLHPNHFM 355

  Fly   359 MLDLKQNIASILR-QILQNMGTRPNKKVYERKIRLCQEILLVLKVVTPGISRLKAIALYELANTQ 422
            :||:||||||||| ..|.|...:|.||:..|::.||.::|.|.:.|.||||:|.||.|:|.....
  Fly   356 LLDIKQNIASILRAAALMNSMDQPCKKLLARRVELCSDLLPVCRAVVPGISKLYAIGLFEYLLAL 420

  Fly   423 AELARKMYTEMEHSANDLLAELERVEVMLRESLRMLLFEPLATPEGQLTRSMLRELKELQDDIK 486
            .||....:.|.:.|..:.:|.|....::..|::.:|.|||..:.||.|...:..||:.::.|:|
  Fly   421 VELVELQFAESDLSKKEYVAHLRTASLVATEAMDLLRFEPENSAEGYLADRISMELERIESDLK 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 28/85 (33%)
SmydA-7NP_611181.1 SET_SMYD <178..268 CDD:380997 29/90 (32%)

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