DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and Smyd4-1

DIOPT Version :10

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster


Alignment Length:546 Identity:112/546 - (20%)
Similarity:195/546 - (35%) Gaps:150/546 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GRFAVALCNVRAGETLLLENPIVVLPLMGERRCSKCFNLTES-------------FC-RKCRLL- 70
            ||:.||...:..|..:..|.....:||.....|.:|.....|             :| ||||.. 
  Fly   226 GRYMVAKEAISKGNVIFSERASCFVPLEQLLICQQCAATLMSAPIPCPNCHQRVVYCSRKCREAH 290

  Fly    71 -ALCE-DCSDHDERDCKR----------------------LAEMNFS----DDQVELLQKKEHTE 107
             |:.: :|:.: .:|..|                      |.||..:    ::.:.|.:|.|.:|
  Fly   291 SAIHKFECAAY-RKDILRLLGISHLALRLLLTYIPYIRPHLQEMTSAKGMWEEIMNLSRKPEESE 354

  Fly   108 IQPVLKCLLLREHEETLPLYEEMSQMDS----------------QLMTRRGTEVWKNYQEHAFTP 156
            ..|           |.|.....:||:|.                ||..:..|:.:..:.....:.
  Fly   355 NAP-----------EYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLKEHTDFYDQFHSLPASI 408

  Fly   157 LDYGGVLAQ--LRGA----ADEDLVQGLLGI-LDINAYEIRAPEVGGAMRGLYR----------- 203
            .|:..:::.  ||.|    |:..:...|||: ::...:.:..||:....|.|.|           
  Fly   409 EDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQKPRHLKRGQLHNLSHSDP 473

  Fly   204 -------RAGLFAHSCTPNLVISIDDEQRIKVYANRFIAAGEILYNCYT----NVLLGTEERRKI 257
                   ...|..|:|.|::....|....:. ||.:.|..||.::||||    |.|  ..:|...
  Fly   474 ITAINLPYLSLCNHACEPSIRTKFDGCSVVN-YAAKDILEGEEIFNCYTMDYRNSL--KLQRSHP 535

  Fly   258 LKVGKCFDCSCPRC--QDPTELGTHMSSFICSQCSCVDGYIVRQPDTGI------WQCLLNPE-- 312
            ||....|:|:|.:|  .||.:.......:.|.:.:|...::   ||..:      |....|.|  
  Fly   536 LKAIYKFECTCAKCTRTDPDQNYLSFHRYRCEKPNCRQEFL---PDAKVQQNNLRWWLRCNAEKP 597

  Fly   313 ------HTLK-----QEFV----SNMLERAKEEIFHARDDIYRQELLLAKLSRLLHRNHFLMLDL 362
                  |.|:     .||:    |:.....::.:|.|.||          |.:.|..:|.|...:
  Fly   598 ITCTVCHELQHFAWYNEFLGLIGSSADSSKRQALFKAFDD----------LDKWLVDHHSLKRIM 652

  Fly   363 KQNIASILRQILQNMGTRPNKKVYERKIRLCQEILLVLKV-----VTPGISRLKAIALYE-LANT 421
            .:.:.:.....:.. ||..::..||...|:.::.|..:..     .|..|:|:  ..|:: :|..
  Fly   653 AEELVTACFYEIDG-GTSLDEFEYEDLARIIRKQLEGIAAQCGDNSTEYIARM--TYLWDIIAQK 714

  Fly   422 QAELARKMYTEMEHSANDLLAELERV 447
            :....||...||:...:.|.:|...|
  Fly   715 KCRTDRKELLEMKGKVDYLASEHREV 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 27/107 (25%)
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 6/25 (24%)
zf-MYND 258..298 CDD:460312 9/39 (23%)
SET <359..549 CDD:394802 42/192 (22%)

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