DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and LOC3291442

DIOPT Version :10

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:XP_061508966.1 Gene:LOC3291442 / 3291442 VectorBaseID:AGAMI1_005176 Length:453 Species:Anopheles gambiae


Alignment Length:299 Identity:59/299 - (19%)
Similarity:98/299 - (32%) Gaps:93/299 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 RKCEIKQNDTLGRFAVALCNVRA---GETLLLENPIVVLPLMGE---RRCSKCFNLTESFCRKCR 68
            |.|.||....:|.....:...|:   |..:|:|.|. ||.|..|   :||..|....|...|.|.
Mosquito   166 RHCSIKACLEVGEDGEGIRTNRSLEDGAKVLVEKPF-VLVLEAELAYQRCDFCGATNEHNLRPCT 229

  Fly    69 ----LLALCEDCSD-----HDERDCK----------------------RL---AEMNFSDD---- 95
                ::...|:|.:     :.:.:|:                      ||   |.:.|.:|    
Mosquito   230 GCTGVMYCSEECQEQSYQRYHQFECEIVDDLQLLFRGPKPTRMFHVVLRLFWHAVLLFLEDPEAF 294

  Fly    96 ------QVELLQKKEHTEIQP---VLKCLLLREHEETLPLYEEMSQMDSQLMT------------ 139
                  ..||.|.::...::|   ||..|.:.:..|..|  |:...|..:.:|            
Mosquito   295 LRRVETPAELEQYRDPFALEPTDYVLHLLAIYKDREPNP--EDSKDMTGRCVTQFMAILMYAIAV 357

  Fly   140 RRGTEVWKNYQEHAFTPLDYGGVLAQLRGAADEDLVQGLLGILDINAYEIRAPEVGGAMRGL--- 201
            :....:|...|              .:.|:  |.|...|..::.      |...:...|.|:   
Mosquito   358 KENVSLWSRLQ--------------AVEGS--EKLPHLLFRLVQ------RVAAMDHKMEGVTCF 400

  Fly   202 YRRAGLFAHSCTPNLVISIDDEQRIKVYANRFIAAGEIL 240
            |........|.|.|...|:|::.:..|.....:|.|:.|
Mosquito   401 YPFTRRLRRSSTSNAKQSVDEQLQSVVVLTGPVAEGQEL 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 13/59 (22%)
LOC3291442XP_061508966.1 None

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