DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and SmydA-8

DIOPT Version :9

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_001014717.1 Gene:SmydA-8 / 31200 FlyBaseID:FBgn0053548 Length:462 Species:Drosophila melanogaster


Alignment Length:450 Identity:106/450 - (23%)
Similarity:183/450 - (40%) Gaps:92/450 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 IKQNDTLGRFAVALCNVRAGETLLLENPIVVLPLMGERRCSKCFNLTES------FCRKCRLLAL 72
            |..:...||...|..::.|||.:..|..:|..|...:.:.|.|....|:      .||....|.:
  Fly    59 ISSSTVAGRGVFATRDIAAGELIFQERALVTGPTARKGQLSSCICCHETLPQTGFLCRHRCTLPV 123

  Fly    73 CEDCSDHDER--DCKRLAEMNFSDDQVELLQKKEHTEIQPV-LKCL----LLREHEETLPLYEEM 130
            ||.|||.:|.  :|:........|...      |..::.|: |:.|    :....:|...|.:.|
  Fly   124 CETCSDSEEHQAECEHFRRWQPKDVDA------EQEQVNPMSLRILTAVRVFHLGKEQRHLVDAM 182

  Fly   131 SQMDSQLMTRR----GTEVWKNY--QEHAFTPLDYGGVLAQLRGAADEDLVQGLLGILDINAYEI 189
             |.:::...||    ..:.::|:  .:..|.                 |.:..::|:|:.||:| 
  Fly   183 -QANAERAYRREIIQAAQCFRNFPTTDRVFM-----------------DQLFRIVGVLNTNAFE- 228

  Fly   190 RAP-EVGG---AMRGLYRRAGLFAHSCTPNLVISIDDEQRIKVYANRFIAAGEILYNCYTNVLLG 250
             || ..||   .:|||:....:..|.||||.....::.:...|.|.|.|..|..:...||.:|.|
  Fly   229 -APCRSGGHETLLRGLFPLTAIMNHECTPNASHYFENGRLAVVRAARDIPKGGEITTTYTKILWG 292

  Fly   251 TEERRKILKVGKCFDCSCPRCQDPTELGTHMSSFICSQCSCVDGYIV------RQPDTGIWQCLL 309
            ...|...||:.|.|.|.|.||.|.||.||::|:..|.:..| .|.::      .|||   |:|:.
  Fly   293 NLTRNIFLKMTKHFACDCVRCHDNTENGTYLSALFCREQGC-RGLVIPVQTRTLQPD---WRCIT 353

  Fly   310 ------NPEHTLKQEFVSNMLER-----AKEEIFHARDDIYRQELLLAKLSRLLHRNHFLMLDLK 363
                  :.:....|:|..|.:..     :.:::.|..:::         ..|....:::::::.|
  Fly   354 CENVFPHAKMAKYQDFALNTINNRINSCSVQDMIHFINEL---------CPRFCPSSNYVLIEAK 409

  Fly   364 QNIASILRQILQNMGTRPNKKVYE-----RKIRLCQEILLVLKVVTPGISRLKAIALYEL 418
            .|:  |.|.      ||.:.:.|.     ...|..:|:|.:|..:..|...||.:...|:
  Fly   410 LNV--IWRM------TRFDHEEYTPEEMGHMDRYREEVLAILHKLGAGECTLKKLITGEI 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET <179..244 CDD:279228 22/68 (32%)
SmydA-8NP_001014717.1 SET <189..293 CDD:214614 30/122 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR46455
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.920

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