DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and set6

DIOPT Version :9

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_596514.1 Gene:set6 / 2541370 PomBaseID:SPBP8B7.07c Length:483 Species:Schizosaccharomyces pombe


Alignment Length:373 Identity:81/373 - (21%)
Similarity:139/373 - (37%) Gaps:88/373 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GRFAVALCNVRAGETLLLENPIVVLPLMG---ERRCSKCFNLTE-----SFCRKCRLLALCEDCS 77
            |:..||..|:..|: :::...:.:|.|..   .|.||.|   ||     ..|..|:::..|    
pombe    15 GKGTVATDNIPIGK-IIIRKRVDILSLDSANLTRTCSTC---TEEKVKTQRCAACKIIHYC---- 71

  Fly    78 DHDERDCKRLAEMNFSDDQVELLQKKEHTEIQPVLKCLLLREH---EETLPLYEEM--------- 130
               .:.|:: |:..|...:.:.||..:...|.|.:..||:|.:   ::...:.|.|         
pombe    72 ---SKGCQK-ADWPFHKLECKALQASKQNGILPSVCRLLIRLYLLWQKNPAIIEPMEGHQNEFQA 132

  Fly   131 ---SQMDSQLMTRRGTEVWKNYQEHAFTPLDYGGVLAQLRGAADEDLVQGLLGILDINAYEI--- 189
               |..|::|:....:...:.||                     .:|.|.|...|.:||..:   
pombe   133 VSSSWSDAELIASAASHYTQIYQ---------------------AELFQKLFCRLAVNAMNLVTS 176

  Fly   190 RAPEVGGAMRGLYRRAGLFAHSCTPNLVISIDDEQRIKVYANRFIAAGEILYNCYTNVLLGTEER 254
            ....:|..:..:..|..   |||.||..| |.|...:::.:.|.|...|.|:..|.::.|....|
pombe   177 SFDSLGMCLDTILCRLN---HSCDPNCQI-IFDGAIVQLVSKRDIKKDEQLFISYIDIRLPKSIR 237

  Fly   255 RKILKVGKCFDCSCPRCQ-DPTELGTHMSSF---ICSQCSCVDGYIVRQPDTGIWQC-------- 307
            :|.|.....|.|.||||: |.|...|..|.:   :.:..|.:....:.:   .:|.|        
pombe   238 QKQLLKKYFFSCYCPRCENDHTTKETDGSKWMGRLRNSKSLMKNLAMAR---DLWSCGWKQTAFP 299

  Fly   308 ---LLN-------PEHTLKQEFVSNMLERAKEEIFHARDDIYRQELLL 345
               ||:       .|......|.:..|:.:.:|...|...:...:|||
pombe   300 WSNLLHHIKLGMLDESNFNGAFAALYLKSSADEFLDALHVVDEYQLLL 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET <179..244 CDD:279228 17/67 (25%)
set6NP_596514.1 SET 5..483 CDD:225491 81/373 (22%)
zf-MYND 49..87 CDD:280009 11/48 (23%)
SET <142..227 CDD:279228 23/109 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 77 1.000 Inparanoid score I1875
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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