DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-6 and set5

DIOPT Version :9

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_588413.1 Gene:set5 / 2538853 PomBaseID:SPCC1739.05 Length:319 Species:Schizosaccharomyces pombe


Alignment Length:328 Identity:70/328 - (21%)
Similarity:115/328 - (35%) Gaps:88/328 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 ADEDLVQGLLGILDINAYEIRAPEVGGAMRGLYRRAGLFAHSCTPNLVISIDDE-QRIKVYANRF 233
            |..|.:...||....||..|  .|..|   |::.......|.|:||:..:.:.. .::.|:|.|.
pombe    70 AHPDTMGPFLGPFYSNALTI--DETKG---GMFLLGSRMNHDCSPNVKHTWNPRLDQVTVHAVRD 129

  Fly   234 IAAGEILYNCYTNVLLGTEERRKILKVGKCFDCSCPRCQDPTELGTHMSSFICSQCSCVDGYIVR 298
            |.|||.:...|.::.....||:|||.....|.|.|..|.........:|.....|.:..|..:.:
pombe   130 IEAGEEILTTYIDLHKSHTERQKILLEHFGFKCYCSVCSVEERKIRKISDLRRKQLAYYDRTMAK 194

  Fly   299 QPDTGIWQCLLNPEHTLKQEFVSNMLERAKEEIFHARDDIYRQELLLAKLSRL--LHRNHFLMLD 361
                   .|::||...|:.  :.:.:..|.||:...|.||    :.|....||  :|        
pombe   195 -------MCIVNPRGALRA--LRHRIHIAHEELLFGRLDI----IALLDAFRLCVIH-------- 238

  Fly   362 LKQNIASILRQILQNMGTRPNKKVYERKIRLCQEILLVLKVVTPGISRLKAIALYELANTQAELA 426
                            |......::.:|                   ..|||:|||  .|.:|..
pombe   239 ----------------GDFERASIFAKK-------------------GTKAISLYE--GTDSEKY 266

  Fly   427 RKMYTEMEHSANDLLAE-LERVEVMLRESLRMLLFEPLATPEGQLTRSMLRELKELQDDIKNLRE 490
            .|:...:|:..:..||| :..:.:.|.|.                     .||.:|:|::...:.
pombe   267 LKISKYVENPRSHALAEGVPALPLFLEED---------------------DELSDLEDNLWGCKL 310

  Fly   491 SDD 493
            .:|
pombe   311 EED 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET <179..244 CDD:279228 19/65 (29%)
set5NP_588413.1 SET <1..319 CDD:225491 70/328 (21%)
SET 4..147 CDD:214614 22/81 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.