Protein Alignment SmydA-6 and set-18

DIOPT Version :9

• Sequence 1: NP_611182.1
• Gene: SmydA-6 / 36917
• FlyBaseID: FBgn0034183
• Length: 498
• Species: Drosophila melanogaster
• Sequence 2: NP_871849.1
• Gene: set-18 / 172949
• WormBaseID: WBGene00044070
• Length: 507
• Species: Caenorhabditis elegans
• Alignment Length: 401
• Identity: 86/401 - (21%)
• Similarity: 152/401 - (37%)
• Gaps: 131/401 - (32%)

  Fly    46 PLMGER--RCSKC-FNLTESFCRK-CRLLALCEDCSDHDERDCKR---------LAEMNFSD--- 94
            |..||:  ||..| |::   :|.| |:..|...     .:.:|||         |.|:.|..
 Worm    56 PAPGEKLLRCGGCNFSM---YCSKECQATAWLV-----HKPECKRLKASFPNLPLTEVLFLSKVI 112

  Fly    95 DQVELLQK---KEHTEIQPVLKCLL-----LREHEETL----PLYEEMSQMDSQLMTRRGTEVWK 147
            |:::.|:|   |...|.:.....|:     :|:.||.:    .::|:|.....:.|..:|
 Worm   113 DRIQFLEKNGDKLGIEAERKFSSLVDHKVDIRDDEEKMAHFEKIFEKMGAFRGEEMIEKG----- 172

  Fly   148 NYQEHAFTPLDYGGVLAQLRGAADEDLVQGLLGILDINAYEIR---APEVGGAM-RGLYRRAGLF 208
                      ::..|..:                ..||::.|.   ..|||.|: .|:.:    :
 Worm   173 ----------EFFDVFCK----------------ATINSHSIHTNAGNEVGMALDLGVSK----Y 207

  Fly   209 AHSCTPN--------------LVISIDDEQRIKVYANRFIAAGEILYNCYTNVLLGTEERRKILK 259
            .|||.|.              ||..:|.|...:.:.: :|..|...|           .||:.|.
 Worm   208 NHSCRPTCSMVFDGYRVCLRPLVPGVDAENTEEAFIS-YIDVGRSKY-----------IRRRDLN 260

  Fly   260 VGKCFDCSCPRCQDPTELGTHMSSFICSQCSCVDGYIV----RQP-DTGIWQC-LLNPEHTLK-- 316
            ....|:|.|.||.||.:  ..:::..|:..:| |..|:    .:| :....:| .:..|.|:|
 Worm   261 SRWYFNCECTRCMDPED--DALTAIRCANPAC-DAPILTSETEEPMNIACEKCKTIVEEDTVKAA 322

  Fly   317 QEFVSNM-----------LE----RAKEEIFHARDDIYRQELLLAKL-SRLLHRNHFLMLDLKQN 365
            ||::..:           :|    :.||.:..|...::...:.:|:| :.|.|....|.:|   |
 Worm   323 QEYMKTLPASFDPKCPAEIEALPGKLKELLAKAEQILHPSNVYVARLRTALFHVTGTLTMD---N 384

  Fly   366 IASILRQILQN 376
            ::|:..||..|
 Worm   385 LSSMHTQIYNN 395

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SmydA-6	NP_611182.1	SET	<179..244	CDD:279228	19/82 (23%)
set-18	NP_871849.1	zf-MYND	49..90	CDD:366792	11/41 (27%)
		SET	82..274	CDD:394802	48/243 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S4564
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D981799at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.870