DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and LOC1279935

DIOPT Version :10

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:XP_061513200.1 Gene:LOC1279935 / 1279935 VectorBaseID:AGAMI1_000730 Length:755 Species:Anopheles gambiae


Alignment Length:577 Identity:104/577 - (18%)
Similarity:177/577 - (30%) Gaps:233/577 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AVTDDFARKCEIKQND-------------------TLGRFAVALCNVRAGETLLLENPIVVLPLM 48
            |:.|...|.|.:::::                   .:||:.||...::|.:|:..|..:..:|:.
Mosquito   186 AMYDAADRDCTVEEDENATTLVPCEEAVLKEQEAPAVGRYVVAAEAIKANDTVARETAVSFVPVY 250

  Fly    49 GERRCSKCFNLTESFCRKCRLLAL----CEDCSDHDERDCKRLAEMNFSDDQVELLQKKEHTEIQ 109
            .....|   .|....|:||..:.:    |..|.    |.|       :...:..:..:..|.   
Mosquito   251 DPESSS---TLPSFDCQKCAKVNVVPFPCPTCG----RAC-------YCSTRCRVAHRPVHR--- 298

  Fly   110 PVLKCLLLREH--------------------------------------------EETLPL---- 126
              .:|...|:|                                            ||..|.    
Mosquito   299 --FECFGYRKHLWYQIGIAHLGLRCFLDGFGTIAGEMAKATDASVCYQRVLEATREEDNPFSHYG 361

  Fly   127 --------YEEMSQMDSQLMTRRG----------TEVWKNYQEHAFTPLDY-------------- 159
                    :::|...|....|..|          |...:..::.|..|.:.              
Mosquito   362 RVLRLVTNFDKMDPDDRMRYTLAGLMLTIYLQECTPFAEAVKDCAMPPAELLVCCGAFITRHIGQ 426

  Fly   160 ----GGVLAQLRGAA----------DEDLVQGLLGILDINAYEIRAPEVGGAMRGLYRRAGLFAH 210
                |..:::||.|.          |..|:.|.|.:.      :::..|   ...::.|..:|.|
Mosquito   427 LVCNGHAISELRLALPSKGQFYNLNDSLLLAGTLHLC------LKSSRV---FTAIFPRISMFNH 482

  Fly   211 SCTPNLVISIDDEQRIKVYANRFIAAGEILYNCY--TNVLLGTEERRKILKVGKCFDCSCPRCQ- 272
            ||.|| :.:..:...:.|:|.|.|.||..::|||  ...|:...||:.:|:...||||.|.||: 
Mosquito   483 SCDPN-IRNHFERATLTVHATRPIGAGGEVFNCYGPHYRLMAAAERKMLLRAQYCFDCGCERCRE 546

  Fly   273 -DPT-------------------ELGTHMSSFICSQCSCVDGYIVRQPDTGIWQCLLNPEHTLKQ 317
             |.|                   ||.......:|..||.                      .:..
Mosquito   547 GDATFEQRFNMIRCPACRREYSKELNLEELPTVCVYCSA----------------------EIPS 589

  Fly   318 EFVSNMLE------RAKEEIFHARDDIYRQELLLAKLSRLLHRNHFLMLDLKQNIASILRQILQN 376
            |::|.:|:      |.:...|...:..|.....:     |:|.|        |..|..||.||:.
Mosquito   590 EWLSQILDLDPDDRRDETRNFQRAESAYNYGKQI-----LIHSN--------QTRAIALRHILEC 641

  Fly   377 MGTRPNKKVYERKIRLCQEILLVLKVVTPGISRLKAIALYELANTQAELARKMYTEM 433
            .          .:|..|:           |::.  :.||.:||...|.|.|:.:..|
Mosquito   642 F----------TRIATCK-----------GLAH--SNALNQLALEYALLMRERFGHM 675

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 26/87 (30%)
LOC1279935XP_061513200.1 None

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