DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and LOC1272665

DIOPT Version :10

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:XP_559081.4 Gene:LOC1272665 / 1272665 VectorBaseID:AGAMI1_004335 Length:511 Species:Anopheles gambiae


Alignment Length:515 Identity:182/515 - (35%)
Similarity:284/515 - (55%) Gaps:48/515 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 VTDDFARKCEIKQNDTLGRFAVALCNVRAGETLLLENPIVVLPLM-GERRCSKCFNLTESFCRKC 67
            :.::|...|||:::|.||||.||..:::.||.:|.|:||||.|.. .:..|..|.......||.|
Mosquito     1 MANNFEDICEIRKSDQLGRFLVANRDIKPGELILAEDPIVVGPYWDADISCLGCLGPASRTCRVC 65

  Fly    68 RLLALCEDCSDHDERDCKRLAEMNFSDDQVELLQKK---EHTEIQPVLKCLLLREHEETLPLYEE 129
            ....||.|||.||..:|...       :|...|.|.   :|..|...|:||||  :......|.|
Mosquito    66 LKGPLCRDCSRHDPVECSFY-------EQASKLNKNFLFDHFNIITPLRCLLL--YRSDRDKYNE 121

  Fly   130 MSQMDSQLMTRRGTEVWKNYQEHAFTPL----DYGGVLAQLRGAADE-----DLVQGLLGILDIN 185
            |..|:|...:||.||:|..:.::...|:    |:..:        |:     :|:|.:.||||:|
Mosquito   122 MMAMESHFESRRDTEIWHIHNQYVVEPMLNEKDFQQI--------DDLTVTGELLQRICGILDVN 178

  Fly   186 AYEIR------APEVGGAMRGLYRRAGLFAHSCTPNLVISIDDEQRIKVYANRFIAAGEILYNCY 244
            .:|||      ..::....||||.:..|..|:|..|.:|::|...::::|::..|.|||:||..|
Mosquito   179 TFEIRGNMDSQGVQMNNLARGLYPKTSLMTHNCQTNTLIAVDGMSKLRLYSSIGIKAGELLYYNY 243

  Fly   245 TNVLLGTEERRKILKVGKCFDCSCPRCQDPTELGTHMSSFICSQCSCVDGYIVRQPDTGIWQCLL 309
            |.||..|.||:..|:.||.|.|:|.||.||||||||:||..|:.|.  ||..|...:|..|:| |
Mosquito   244 TRVLFSTFERQTHLRKGKYFICNCARCSDPTELGTHLSSLKCTACD--DGLCVFHTETPKWEC-L 305

  Fly   310 NPEHTLKQEFVSNMLERAKEEIFHARDDIYRQELLLAKLSRLLHRNHFLMLDLKQNIASILRQI- 373
            ...|.|.:|:|:.::..|:::|.....|....|.::.|.|:.|:.:|.|:|:.||::|..||.: 
Mosquito   306 TCGHQLPREYVNQIMCEARDDISSCALDSRNLEKVIGKHSKTLNPHHSLVLEAKQSLAGELRNMC 370

  Fly   374 ----LQNMGTRPNKKVYERKIRLCQEILLVLKVVTPGISRLKAIALYELANTQAELARKMYTEME 434
                :.|:    .::..:||:.||:|:|.:|:|:.||:|||..|||||......:|:|:.:...|
Mosquito   371 MSYDIHNV----PRQALKRKLELCEEMLQILRVLDPGVSRLTGIALYEYHAALVDLSRRNHDIGE 431

  Fly   435 HSANDLLAELERVEVMLRESLRMLLFEPLATPEGQLTRSMLRELKELQDDIKNLRESDDD 494
            ....:||..|:..|..|:|::.||:||...|||||||:..:.|||||::.|:.::..::|
Mosquito   432 IKTPELLERLKLSEAALKEAIGMLVFEHRTTPEGQLTKKAMCELKELREYIQKVQAMEED 491

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 34/91 (37%)
LOC1272665XP_559081.4 None

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