DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-6 and SMYD4

DIOPT Version :9

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_443160.2 Gene:SMYD4 / 114826 HGNCID:21067 Length:804 Species:Homo sapiens


Alignment Length:626 Identity:127/626 - (20%)
Similarity:211/626 - (33%) Gaps:238/626 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GRFAVALCNVRAGETLLLENPIV------VLP--------------LMGERRCSKC--------- 56
            ||..||..::..||.|:.|:..|      .||              ..|:..|.:|         
Human   244 GRCLVATKDILPGELLVQEDAFVSVLNPGELPPPHHGLDSKWDTRVTNGDLYCHRCLKHTLATVP 308

  Fly    57 ---------------------FNLTES-----------FCR---KCRLLALCEDCSDHDERDCKR 86
                                 ::.||.           ||.   :..||...||......:.|.:
Human   309 CDGCSYAKYCSQECLQQAWELYHRTECPLGGLLLTLGVFCHIALRLTLLVGFEDVRKIITKLCDK 373

  Fly    87 LAEMNF----SDDQVELL-------QKKEHTEIQPVLKCLLLREHEET-------LPLYEEMSQM 133
            ::..:.    |::||:.|       :|..:....|:..|.:..::|..       ||..|..|  
Human   374 ISNKDICLPESNNQVKTLNYGLGESEKNGNIVETPIPGCDINGKYENNYNAVFNLLPHTENHS-- 436

  Fly   134 DSQLMTRRGTEVWKNYQEHAF-TPLDYGGVLAQLRGAADEDLVQGLLGILDINAYEIRA------ 191
                            .||.| ..|....:..||..|:    :|.:.....:|:.:::|      
Human   437 ----------------PEHKFLCALCVSALCRQLEAAS----LQAIPTERIVNSSQLKAAVTPEL 481

  Fly   192 -PEV---GGAM------------------------------------RGLYRRAGLFAHSCTPNL 216
             |:|   |.||                                    .|::....|..|||:||.
Human   482 CPDVTIWGVAMLRHMLQLQCNAQAMTTIQHTGPKGSIVTDSRQVRLATGIFPVISLLNHSCSPNT 546

  Fly   217 VIS-IDDEQRIKVYANRFIAAGEILYNCY--TNVLLGTEERRKILKVGKCFDCSCPRCQDPTE-- 276
            .:| |.....|:  |::.|..|:.:.:||  ....:|..||::.|:....|||:||.||  ||  
Human   547 SVSFISTVATIR--ASQRIRKGQEILHCYGPHKSRMGVAERQQKLRSQYFFDCACPACQ--TEAH 607

  Fly   277 ---LGTHMSSFICSQCSCVDGYIVRQPDTGIWQCLLNPEHTLKQEFVSNMLERAKEEIFHARDDI 338
               .|....:|.|:.|..                      .::.:.|.....|:..|...:||.:
Human   608 RMAAGPRWEAFCCNSCGA----------------------PMQGDDVLRCGSRSCAESAVSRDHL 650

  Fly   339 YRQELLLAKLSRLLHRNHFLMLDLKQNIASILRQILQNMGTRPNKKVYERKI-RL--CQ---EIL 397
                     :|||        .||:|.: .:.:::|::       ...||.: ||  ||   |..
Human   651 ---------VSRL--------QDLQQQV-RVAQKLLRD-------GELERAVQRLSGCQRDAESF 690

  Fly   398 L-----VLKVVTPGISRLKAIALYELANTQAELARKMY-TEMEH--SANDLLAELERVEVMLRES 454
            |     |:..:..|::|..| ||.:...:...|.|.:| .|:.|  |:.::..||.:        
Human   691 LWAEHAVVGEIADGLARACA-ALGDWQKSATHLQRSLYVVEVRHGPSSVEMGHELFK-------- 746

  Fly   455 LRMLLFEPLATPEGQLTRSMLRELKEL-----QDDIKNLRE 490
            |..:.|...|.||...|.....|:..|     .|:|:.|::
Human   747 LAQIFFNGFAVPEALSTIQKAEEVLSLHCGPWDDEIQELQK 787

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET <179..244 CDD:279228 20/111 (18%)
SMYD4NP_443160.2 TPR repeat 68..96 CDD:276809
PLN03088 <72..>237 CDD:330826
TPR repeat 101..135 CDD:276809
S-adenosyl-L-methionine binding. /evidence=ECO:0000250 112..114
TPR repeat 143..171 CDD:276809
zf-MYND 296..335 CDD:307734 3/38 (8%)
SET <528..574 CDD:307139 14/47 (30%)