DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-6 and SMYD4

DIOPT Version :10

Sequence 1:NP_611182.1 Gene:SmydA-6 / 36917 FlyBaseID:FBgn0034183 Length:498 Species:Drosophila melanogaster
Sequence 2:NP_443160.2 Gene:SMYD4 / 114826 HGNCID:21067 Length:804 Species:Homo sapiens


Alignment Length:626 Identity:127/626 - (20%)
Similarity:211/626 - (33%) Gaps:238/626 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 GRFAVALCNVRAGETLLLENPIV------VLP--------------LMGERRCSKC--------- 56
            ||..||..::..||.|:.|:..|      .||              ..|:..|.:|         
Human   244 GRCLVATKDILPGELLVQEDAFVSVLNPGELPPPHHGLDSKWDTRVTNGDLYCHRCLKHTLATVP 308

  Fly    57 ---------------------FNLTES-----------FCR---KCRLLALCEDCSDHDERDCKR 86
                                 ::.||.           ||.   :..||...||......:.|.:
Human   309 CDGCSYAKYCSQECLQQAWELYHRTECPLGGLLLTLGVFCHIALRLTLLVGFEDVRKIITKLCDK 373

  Fly    87 LAEMNF----SDDQVELL-------QKKEHTEIQPVLKCLLLREHEET-------LPLYEEMSQM 133
            ::..:.    |::||:.|       :|..:....|:..|.:..::|..       ||..|..|  
Human   374 ISNKDICLPESNNQVKTLNYGLGESEKNGNIVETPIPGCDINGKYENNYNAVFNLLPHTENHS-- 436

  Fly   134 DSQLMTRRGTEVWKNYQEHAF-TPLDYGGVLAQLRGAADEDLVQGLLGILDINAYEIRA------ 191
                            .||.| ..|....:..||..|:    :|.:.....:|:.:::|      
Human   437 ----------------PEHKFLCALCVSALCRQLEAAS----LQAIPTERIVNSSQLKAAVTPEL 481

  Fly   192 -PEV---GGAM------------------------------------RGLYRRAGLFAHSCTPNL 216
             |:|   |.||                                    .|::....|..|||:||.
Human   482 CPDVTIWGVAMLRHMLQLQCNAQAMTTIQHTGPKGSIVTDSRQVRLATGIFPVISLLNHSCSPNT 546

  Fly   217 VIS-IDDEQRIKVYANRFIAAGEILYNCY--TNVLLGTEERRKILKVGKCFDCSCPRCQDPTE-- 276
            .:| |.....|:  |::.|..|:.:.:||  ....:|..||::.|:....|||:||.||  ||  
Human   547 SVSFISTVATIR--ASQRIRKGQEILHCYGPHKSRMGVAERQQKLRSQYFFDCACPACQ--TEAH 607

  Fly   277 ---LGTHMSSFICSQCSCVDGYIVRQPDTGIWQCLLNPEHTLKQEFVSNMLERAKEEIFHARDDI 338
               .|....:|.|:.|..                      .::.:.|.....|:..|...:||.:
Human   608 RMAAGPRWEAFCCNSCGA----------------------PMQGDDVLRCGSRSCAESAVSRDHL 650

  Fly   339 YRQELLLAKLSRLLHRNHFLMLDLKQNIASILRQILQNMGTRPNKKVYERKI-RL--CQ---EIL 397
                     :|||        .||:|.: .:.:::|::       ...||.: ||  ||   |..
Human   651 ---------VSRL--------QDLQQQV-RVAQKLLRD-------GELERAVQRLSGCQRDAESF 690

  Fly   398 L-----VLKVVTPGISRLKAIALYELANTQAELARKMY-TEMEH--SANDLLAELERVEVMLRES 454
            |     |:..:..|::|..| ||.:...:...|.|.:| .|:.|  |:.::..||.:        
Human   691 LWAEHAVVGEIADGLARACA-ALGDWQKSATHLQRSLYVVEVRHGPSSVEMGHELFK-------- 746

  Fly   455 LRMLLFEPLATPEGQLTRSMLRELKEL-----QDDIKNLRE 490
            |..:.|...|.||...|.....|:..|     .|:|:.|::
Human   747 LAQIFFNGFAVPEALSTIQKAEEVLSLHCGPWDDEIQELQK 787

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-6NP_611182.1 SET_SMYD <185..271 CDD:380997 31/134 (23%)
SMYD4NP_443160.2 NlpI <66..>171 CDD:443815
TPR repeat 68..96 CDD:276809
TPR repeat 101..135 CDD:276809
TPR repeat 143..171 CDD:276809
SET 239..>269 CDD:394802 9/24 (38%)
zf-MYND 296..335 CDD:460312 3/38 (8%)
SET_SMYD4 404..602 CDD:380934 46/221 (21%)
TPR_12 660..726 CDD:315987 17/74 (23%)
TPR_12 698..771 CDD:315987 20/81 (25%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.