DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-7 and TPR9

DIOPT Version :10

Sequence 1:NP_611181.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001321056.1 Gene:TPR9 / 840233 AraportID:AT1G33400 Length:810 Species:Arabidopsis thaliana


Alignment Length:602 Identity:110/602 - (18%)
Similarity:173/602 - (28%) Gaps:227/602 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GRHLVASIAIEPGDTILEERPLLVAPHWECHQLKCAQCLQE---SYVICRRCQVFPLC------- 71
            ||.:|:...||....|..|.|..|.....|.:..|..||.|   ..|.|..|.:...|       
plant   241 GRGMVSECDIEEASVIHVEEPFSVVISKSCRETHCHFCLNELPADTVPCPSCSIPVYCSESCQIQ 305

  Fly    72 ---------------------------------------MDCNQHDEFECEFFTSG--------- 88
                                                   .|..|..:.||.    |         
plant   306 SGGMLSTNEMDKHHIFQKLPDDIVEHIKGVTSADIYYFATDLIQEHQHECR----GANWPAVLPS 366

  Fly    89 ----AGKALCKDILVKNFGICGLLKLLLLLE--------NPRTKGDCQMLIDVPI---------N 132
                ||:.:.| ::.:......|..|..:||        ||..|.:..:|..|.|         |
plant   367 DAVLAGRIIMK-LINQGKAATDLSNLQEILELSHTYSKMNPENKLELHLLSIVLIWCLSKSSCPN 430

  Fly   133 LSDYRDGEGMWQEHEELVVRPLMESGLADVLPTQELTSDALHAHCIRIDSNSFEVTAKDGDTLK- 196
            ||                   :.|   |.|..|..|.|.      |:::|.:.......||:.| 
plant   431 LS-------------------VCE---ASVTQTIILLSQ------IKVNSIAVARMKSSGDSFKC 467

  Fly   197 ----------------------GIFVWGATLPHHCVPNT-VVALDEQFNMKLYAAVPLQ-PGDII 237
                                  .::..|:...|.|.||. :..|.....|:....||.. |.::.
plant   468 LPSGNISTKEPIQSLEQIRVGQALYKTGSLFNHSCKPNIHLYFLSRGLIMQTTEFVPTGCPLELS 532

  Fly   238 YNSYTNPLMGTSQRQHQLRLSRR---LECICSRCLDPTEMGTHMSSLKCKECPGFSVCEIDSNGK 299
            |    .|.:|....::::|....   ..|.|..|..     .::|.|...   |:.....:..|.
plant   533 Y----GPEVGKWDCKNRIRFLEEEYFFHCRCRGCAQ-----INISDLVIN---GYGCVNTNCTGV 585

  Fly   300 LGDWRCPDCRA-----LLTAAEVHELQAAVGSALVDAMGDLQVYEALLTQYGPLLH--------- 350
            :.|.....|.:     ..||....:.|..:...:...:|  :|..:||::....||         
plant   586 VLDSNVATCESEKLNHFFTAPRNVDQQVQMREKVYADVG--EVASSLLSKPSGSLHIEPEICLKC 648

  Fly   351 -------------------------------PNHFMLLDIKQNIASILRAAALMNSMD-QPCKKL 383
                                           .|:.:|.|..::|| :||....|.:.| ...:..
plant   649 GSRCDIENSHAEVNKAWNHMRRVEELMNSGRANYSVLSDCSRSIA-VLRTFLHMYNKDIADAEDK 712

  Fly   384 LARRVELCSDLLPV---CRAVVPGISKLY-----AIGLFEYLLALVELVELQFAESDLS------ 434
            :|:...|..:|:..   |.|.:..:.:||     .||     ..:|:|..:|.|..|.|      
plant   713 VAQACYLAGELVDARKHCEASIKILKRLYEDEHVVIG-----NEMVKLASIQLASGDSSGAWDTT 772

  Fly   435 -------KKEYVAHLRT 444
                   .|.|.:|..|
plant   773 KRSSQIFSKYYGSHAET 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_611181.1 SET_SMYD <178..268 CDD:380997 21/117 (18%)
TPR9NP_001321056.1 TPR 78..>182 CDD:440225
TPR repeat 78..103 CDD:276809
TPR repeat 108..147 CDD:276809
zf-MYND 275..>303 CDD:480929 8/27 (30%)
SET 386..562 CDD:394802 40/207 (19%)
TPR_12 705..781 CDD:315987 16/80 (20%)
Blue background indicates that the domain is not in the aligned region.

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