DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-7 and SMYD3

DIOPT Version :9

Sequence 1:NP_001261039.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001161212.1 Gene:SMYD3 / 64754 HGNCID:15513 Length:428 Species:Homo sapiens


Alignment Length:403 Identity:91/403 - (22%)
Similarity:141/403 - (34%) Gaps:114/403 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 KLGRHLVASIAIEPGDTILEERPLLVAPHWECHQLKCAQCL--QESYVICRRCQVFPLC-MDCNQ 76
            |.|..|.|...:.||:.:....||..........:.|.:||  :|..:.|.:|:|...| ..|.:
Human    13 KRGNGLRAVTPLRPGELLFRSDPLAYTVCKGSRGVVCDRCLLGKEKLMRCSQCRVAKYCSAKCQK 77

  Fly    77 -----HDEFECEFFTSGAGKALCKDILVKNFGICGLLKLLLLLENPRTKGDCQMLID-VPINLSD 135
                 |.. ||:...|      ||                     ||...|...|:. |...|.|
Human    78 KAWPDHKR-ECKCLKS------CK---------------------PRYPPDSVRLLGRVVFKLMD 114

  Fly   136 YRDGEGMWQEHEELV--------VRPLME---SGLADVLPT-----QELTSDA--------LHAH 176
                 |...|.|:|.        :..|.|   .||..::.|     :|...||        |...
Human   115 -----GAPSESEKLYSFYDLESNINKLTEDKKEGLRQLVMTFQHFMREEIQDASQLPPAFDLFEA 174

  Fly   177 CIRIDSNSFEV-TAKDGDTLKGIFVWGATLPHHCVPNTVVALDEQFN---MKLYAAVPLQPGDII 237
            ..::..|||.: .|:..:...|::...:.|.|.|.||..:.    ||   :.|.|...::.|:.:
Human   175 FAKVICNSFTICNAEMQEVGVGLYPSISLLNHSCDPNCSIV----FNGPHLLLRAVRDIEVGEEL 235

  Fly   238 YNSYTNPLMGTSQRQHQLRLSRRLECICSRCL-----------DPTEMGTHMSSLKCKECPGFSV 291
            ...|.:.||.:.:|:.|||.....||.|.||.           |.........|||       .:
Human   236 TICYLDMLMTSEERRKQLRDQYCFECDCFRCQTQDKDADMLTGDEQVWKEVQESLK-------KI 293

  Fly   292 CEIDSNGKLGDWR--CPDCRALLTA-----AEVHELQAAVGSALVDAMGDLQVYEALLTQYG--- 346
            .|:.::.|   |.  ...|:|::::     .:::..|..|....:||..:|.:.|..|. ||   
Human   294 EELKAHWK---WEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALF-YGTRT 354

  Fly   347 --------PLLHP 351
                    |..||
Human   355 MEPYRIFFPGSHP 367

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_001261039.1 None
SMYD3NP_001161212.1 S-adenosyl-L-methionine binding. /evidence=ECO:0000269|Ref.12 14..16 0/1 (0%)
zf-MYND 49..87 CDD:280009 10/38 (26%)
SET <201..239 CDD:279228 10/41 (24%)