DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-7 and smyd3

DIOPT Version :9

Sequence 1:NP_001261039.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001032477.1 Gene:smyd3 / 569507 ZFINID:ZDB-GENE-051120-138 Length:380 Species:Danio rerio


Alignment Length:379 Identity:82/379 - (21%)
Similarity:131/379 - (34%) Gaps:79/379 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 EKLGRHLVASIAIEPGDTILEERPLLVAPHWECHQLKCAQCLQ--ESYVICRRCQVFPLCMDCNQ 76
            |..|..|.|...|:||:.|....|.......:..:..|..||:  ||...|.:|:....|     
Zfish    12 EGKGNGLRALREIKPGEVIYSCEPFAFCVARDFLKTACQSCLKRGESLSRCSQCKTARYC----- 71

  Fly    77 HDEFECEFFTSGAGKALCKDILVKNFGICGLLKLLLLLENPRTKGDCQMLI-DVPINLSDYRDGE 140
              ..:|:.......|..||         |  ||.|    .||...|...|: .:...|....:  
Zfish    72 --NVQCQKQAWPDHKRECK---------C--LKHL----QPRIPTDSVRLVARIIFKLLSQSE-- 117

  Fly   141 GMWQEHEELVVRPLMESGLADVLPTQELTSDALH-----------AHC---------------IR 179
               .:.|||......:|.|||:  ::|.|....|           .:|               .|
Zfish   118 ---SDQEELYSIAEHQSHLADM--SEEKTEGLKHLCTTLQVYLAEENCDLSRLPSGLDPVSLLAR 177

  Fly   180 IDSNSFEVTAKDG---DTLKGIFVWGATLPHHCVPNTVVALDEQFNMKLYAAVPLQPGDIIYNSY 241
            :..|.|.::  ||   |...|::...:.|.|.|.||.::..:.: .:.|.|...::..:.:..||
Zfish   178 VTCNCFSIS--DGELQDVGVGLYPSMSLLNHDCQPNCIMMFEGK-RLTLRAVRVIRSAEELTISY 239

  Fly   242 TNPLMGTSQR--QHQLRLSRRLECICSRCLDPT-EMGTHMSSL------KCKECPGFSVCEIDSN 297
            |:.|..:..|  ||...|.:..:.:..|..|.. :...:|..|      .|.....:.......|
Zfish   240 TDILAPSKDRRSQHWDELLKESQALLHRHSDVVPDRNIYMLRLLDLAMDACISLDDYETALEYGN 304

  Fly   298 GKLGDWRC----PDCRALLTAAEVHELQAAVGSALVDAMGDL-QVYEALLTQYG 346
            ..||.::.    |.....:....|.:||..:| .|.:|.|.. |.|..:...:|
Zfish   305 RALGPYKLYFSDPHPSRAVELLRVGKLQHFLG-RLEEARGSFTQAYSIMSVTHG 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_001261039.1 None
smyd3NP_001032477.1 zf-MYND 49..87 CDD:280009 10/44 (23%)
SET <201..239 CDD:279228 7/38 (18%)
TPR_12 276..351 CDD:290160 16/75 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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