DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-7 and smyd2b

DIOPT Version :9

Sequence 1:NP_001261039.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_001025394.1 Gene:smyd2b / 568616 ZFINID:ZDB-GENE-041001-201 Length:437 Species:Danio rerio


Alignment Length:486 Identity:99/486 - (20%)
Similarity:169/486 - (34%) Gaps:163/486 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GRHLVASIAIEPGDTILE-----------ERPLLVAPHWECHQLKCAQCL--QESYVICRRCQVF 68
            ||.|..|.|...|:.:..           ||.|:           |.||.  ::....|.:|:..
Zfish    19 GRGLRVSRAYGVGELLFSCPAYSYVLSVGERGLI-----------CEQCFTRKKGLAKCGKCKKA 72

  Fly    69 PLC-MDCNQHD----EFECEFFTSGAGKALCKDILVKNFG--------ICGLLKLLLLLENPRTK 120
            ..| .:|.:.:    :.||:        |:|.      ||        :..:.:::..|:..:.:
Zfish    73 FYCNANCQKKNWPMHKLECQ--------AMCA------FGENWRPSETVRLVARIIARLKAQKER 123

  Fly   121 GDCQMLI---DVPINLSDYRDGEGMWQEHEELVVRPLMESGLA----------DVLPTQELTSDA 172
            ...::|:   ::..:|.|        .::|:   |.:.|:.:|          |....|.|.:..
Zfish   124 SPSEILLLLGEMEAHLED--------MDNEK---REMTEAHIAGLHQFYSKHLDFPDHQALLTLF 177

  Fly   173 LHAHCIRIDSNSFEVTAKDGDTL-KGIFVWGATLPHHCVPNTVVALDEQFNMKLYAAVPLQPGDI 236
            ...||     |.|.|..::...| ..||...|.|.|.|.||.:|.. ...|.::.|...:.||..
Zfish   178 SQVHC-----NGFTVEDEELSNLGLAIFPDIALLNHSCSPNVIVTY-RGINAEVRAVKDISPGQE 236

  Fly   237 IYNSYTNPLMGTSQRQHQLRLSRRLECICSRC----LDPTEMGTHMSSLKCKE------------ 285
            ||.||.:.|..|:.|..:||......|.|..|    :|..:|.....|.:..|            
Zfish   237 IYTSYIDLLYPTADRLERLRDMYYFSCDCKECTTKSMDVVKMSVRKRSDEIGEKEIKDMVRYARN 301

  Fly   286 ---------------CPGF--SVCE--IDSNGKLGDWRCPDCRALLTAAEVHELQAAVGSALV-- 329
                           |..|  .:||  ||....:.|    |....:    :|.:..|:|..|.  
Zfish   302 SMENFRRAKQDKNILCGSFILEMCELSIDKMSTVFD----DSNVYI----LHMMYQAMGICLFTE 358

  Fly   330 DAMGDLQVYEALLTQYGPLLHPNHFMLLDIKQNIASI-LRAAALMNSMDQPCKKLLARRVELCSD 393
            |..|.::..|.::..: .:|:|.:.|      |:||: |:...|..::|:               
Zfish   359 DYEGAVRYGEKVIKPF-TVLYPAYSM------NVASMFLKLGRLYIALDR--------------- 401

  Fly   394 LLPVCRAVVPGISKLYAIGLFEYLLALVELV 424
                         ||..|..|:..|.::|:|
Zfish   402 -------------KLAGIDAFQKALTIMEVV 419

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_001261039.1 None