DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-7 and SmydA-2

DIOPT Version :10

Sequence 1:NP_611181.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_649084.1 Gene:SmydA-2 / 40075 FlyBaseID:FBgn0036839 Length:530 Species:Drosophila melanogaster


Alignment Length:530 Identity:130/530 - (24%)
Similarity:219/530 - (41%) Gaps:115/530 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 AHDEKLGRHLVASIAIEPGDTILEERPLLVAPHWECHQLKCAQCLQE---------SYVICRRCQ 66
            |.:|.|||||.|:..|:.|:.||:|.||::.|......| |..|.:.         :|..|..|.
  Fly    52 ATNEVLGRHLRATRDIKIGEQILKEAPLVLGPKVASAPL-CLGCHRNLLAPGKPRGNYHKCSSCS 115

  Fly    67 VFPLC-MDCNQ--HDEFECEFFTSGAG----------------KALCKDILVKNFGICGLLKLLL 112
             :||| .:|..  |.:.||:.. ||:.                .|.|               :::
  Fly   116 -WPLCGKECEDSVHHKAECQLM-SGSNFQSKINYVPGEEERKESAYC---------------VIM 163

  Fly   113 LLENPRTKGDCQMLIDVP-------INLSDYRDGEGMWQEHEELVVRPLMESGLADVLPTQELT- 169
            ||.       |..|.|..       .||.|:              ::..:|:.|..||....:| 
  Fly   164 LLR-------CMHLKDKDPDAFLKLYNLEDH--------------LKERLETPLYQVLRANLITF 207

  Fly   170 ------------SDALHAHCIRIDSNSFEV-TAKDGDTLKGIFVWGATLPHHCVPNTVVALDEQF 221
                        .|.|....| :|:|:||| ..::...::.::...|.:.|.||||.....|:..
  Fly   208 IKTVLGMKDWPEMDILRIAAI-LDTNTFEVRQPRERRKIRALYPGAAMISHDCVPNMRHRFDDDM 271

  Fly   222 NMKLYAAVPLQPGDIIYNSYTNPLMGTSQRQHQLRLSRRLECICSRCLDPTEMGTHMSSLKCKEC 286
            |:...|...:..|:|:..|||.||..|.||:..||.::..:|.|:||.||.|:|:...:..|.:|
  Fly   272 NIVFLAKRKIAKGEILSISYTQPLRSTIQRRVHLRQAKCFDCSCARCQDPEELGSFAGAQTCLKC 336

  Fly   287 PGFSVCEIDSNGKLGDWRCPDCRALLTAAEV----HELQAAVGSALVDAMGDLQVYEALLTQYGP 347
            ....:..::.......|:|..|....:|.:|    .|||..:.|  :|....:.: |..:.::..
  Fly   337 KAGKIISLNPLLNSAPWKCQLCNFKRSAKDVVTSDAELQQELES--LDKTTPVAL-EEFIYRHRA 398

  Fly   348 LLHPNHFMLLDIKQNIASILRAAALMNSMDQPCKKLLARRVELCSDLLPVCRAVVPGISKLYAIG 412
            .||..:..:|..|..:..:..:|... :|::...:.|.|:::||.:||.:......|    ::|.
  Fly   399 DLHETNTHILQAKYALTQLYGSAPGF-AMEELSGESLNRKLQLCEELLKLADIFDGG----WSIF 458

  Fly   413 LFEYLLALVELVELQFAES----DLSKKEYVAHLRTASLVATEAMDLLRFEPENSAEGYLADR-- 471
            ....|:.:.|.:..|...|    |..:|     ||.|:.:..|..::::.|||  .:..|.:|  
  Fly   459 RGNLLIDMEEALVTQALRSKDPLDCEEK-----LRNAAEMLREIRNIMKHEPE--MQQLLLERQV 516

  Fly   472 -ISMELERIE 480
             :|..|||.|
  Fly   517 ILSSALERFE 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_611181.1 SET_SMYD <178..268 CDD:380997 29/90 (32%)
SmydA-2NP_649084.1 zf-MYND 9..46 CDD:460312
SET_SMYD <227..318 CDD:380997 29/91 (32%)
Blue background indicates that the domain is not in the aligned region.

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