DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-7 and Smyd4-4

DIOPT Version :10

Sequence 1:NP_611181.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_610730.1 Gene:Smyd4-4 / 36299 FlyBaseID:FBgn0027495 Length:573 Species:Drosophila melanogaster


Alignment Length:440 Identity:84/440 - (19%)
Similarity:154/440 - (35%) Gaps:125/440 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GRHLVASIAIEPGDTILEERPL---LVAPHWECHQLKCAQCLQESYVICRRCQVFPLCMDCNQ-- 76
            ||.:|.:..:..||.:..|.|.   |:.|   ...::||.|.:|:|:....|......|.|::  
  Fly   196 GRFVVTNRDLAVGDLVSVEEPFCSTLLTP---MRYIRCATCKRENYLTLIPCDSCCSTMFCSEEC 257

  Fly    77 -------HDEFEC---EFFTSGAGKALC---KDILVKNFGICGLLKLLLLLENPRTKGDCQMLID 128
                   :..:||   :|......|..|   :..||.......:.:|:...|..:.:..|..   
  Fly   258 KSIAMQTYHRYECPIIDFLNRMFNKIHCIALRTTLVALNIFPSIEELIDFCEQEQNQDKCAF--- 319

  Fly   129 VPINLSD------YRDGEGM-WQEH--------EELVVRPLMESGLADVLPTQE---------LT 169
             .:|.::      ||...|: ..:|        :..||..:::..:.:..|.:|         ..
  Fly   320 -DLNYNELTPEEHYRAIHGLVTNQHLRSVSDLFQRSVVCAVLKHFIIEYTPVKEYLGGEEGVNFF 383

  Fly   170 SDALHAHCIRIDSNSFEV-------TAKDGDT-LKGIFVWGATLPHHCVPNTVVALDEQFNMKLY 226
            :|.|..|.....||...:       ..||..| ..|.:.:.:.:.|.|.||| |.:.|.....::
  Fly   384 TDLLFRHLQTSPSNMHGIDLVEQVNETKDDQTHSSGAYAFLSLINHSCAPNT-VRIYEGTKAYMF 447

  Fly   227 AAVPLQPGDIIYNSYTN--PLMGTSQRQHQLRLSRRLECICSRCLDPTEMGTHMSSLKCKECPGF 289
            ...|::.|:::|::|..  .:....||..:|.|..|.:|.|..|    |:...|..:...:....
  Fly   448 VLRPIKAGNVLYDNYGAHFAICSKEQRLKRLSLQYRFDCKCEGC----ELNYPMFGMMPHKATVP 508

  Fly   290 SVCEIDSNGKLGDWRCPDCRALLTAAEVHELQAAVGSALVD-AMGDLQVYEALLTQYGPLLHPNH 353
            ||.:                         :.:.|:.|...| |:.:.:.|...|||||.      
  Fly   509 SVTD-------------------------DTELALSSYNYDFAVSNYRKYCDFLTQYGD------ 542

  Fly   354 FMLLDIKQNIASILRAAALMNSMDQPCKKL------LARRVELCSDLLPV 397
                                   |.||:::      |...:.:.:|.:|:
  Fly   543 -----------------------DYPCEQISSAEECLKMALHIMADAVPL 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_611181.1 SET_SMYD <178..268 CDD:380997 24/99 (24%)
Smyd4-4NP_610730.1 SET_SMYD4 180..491 CDD:380934 63/302 (21%)
zf-MYND 230..270 CDD:460312 8/39 (21%)

Return to query results.
Submit another query.