DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-7 and Smyd4-1

DIOPT Version :10

Sequence 1:NP_611181.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_610500.2 Gene:Smyd4-1 / 35985 FlyBaseID:FBgn0033427 Length:751 Species:Drosophila melanogaster


Alignment Length:560 Identity:124/560 - (22%)
Similarity:188/560 - (33%) Gaps:187/560 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 GRHLVASIAIEPGDTILEERPLLVAPHWE---CHQLKCAQCLQESYVICRRC--QVFPLCMDCNQ 76
            ||::||..||..|:.|..||.....|..:   |.|  ||..|..:.:.|..|  :|......|.:
  Fly   226 GRYMVAKEAISKGNVIFSERASCFVPLEQLLICQQ--CAATLMSAPIPCPNCHQRVVYCSRKCRE 288

  Fly    77 -HD---EFECEFFTSGAGKALCKDILVKNFGICGLLKLLLLLENPRTKGDCQMLIDVPINLSDYR 137
             |.   :|||        .|..|||| :..||..|...|||...|..:.          :|.:..
  Fly   289 AHSAIHKFEC--------AAYRKDIL-RLLGISHLALRLLLTYIPYIRP----------HLQEMT 334

  Fly   138 DGEGMWQEHEELVVRPLMESGLADVLPT------------QELTSDALHAHCIRI---------- 180
            ..:|||:|...|..:|.......:.|.:            :||....|.|:.:::          
  Fly   335 SAKGMWEEIMNLSRKPEESENAPEYLRSLRMVSQLDQAIDEELNYHILCANLLQLYLKEHTDFYD 399

  Fly   181 DSNSFEVTAKD----------------------GDTLKGI------FV------W---------- 201
            ..:|...:.:|                      ||.|.|:      ||      |          
  Fly   400 QFHSLPASIEDWQLIISALILRFAGQLLANGHVGDALLGVGMEPKEFVMLQPELWQKPRHLKRGQ 464

  Fly   202 -----------GATLP------HHCVPNTVVALDEQFNMKLYAAVPLQPGDIIYNSYT----NPL 245
                       ...||      |.|.|:.....| ..::..|||..:..|:.|:|.||    |.|
  Fly   465 LHNLSHSDPITAINLPYLSLCNHACEPSIRTKFD-GCSVVNYAAKDILEGEEIFNCYTMDYRNSL 528

  Fly   246 MGTSQRQHQLRLSRRLECICSRC--LDPTEMGTHMSSLKCKE--C-----PGFSVCEIDSNGKLG 301
              ..||.|.|:...:.||.|::|  .||.:........:|::  |     |...|    ....|.
  Fly   529 --KLQRSHPLKAIYKFECTCAKCTRTDPDQNYLSFHRYRCEKPNCRQEFLPDAKV----QQNNLR 587

  Fly   302 DW-RCPDCRALLTAAEVHELQ------AAVGSALVDAMGDLQVYEALLTQYGPL---LHPNHFML 356
            .| || :....:|....||||      ..:|  |:.:..|....:||...:..|   |..:|   
  Fly   588 WWLRC-NAEKPITCTVCHELQHFAWYNEFLG--LIGSSADSSKRQALFKAFDDLDKWLVDHH--- 646

  Fly   357 LDIKQNIASILRAAALM-----NSMDQPCKKLLARRVELCSDLLPVCRAVVPGISKLYAIGLFEY 416
             .:|:.:|..|..|...     .|:|:         .|. .||..:.|..:.||:........||
  Fly   647 -SLKRIMAEELVTACFYEIDGGTSLDE---------FEY-EDLARIIRKQLEGIAAQCGDNSTEY 700

  Fly   417 LLALV----------------ELVELQFAESDLSKKEYVA 440
            :..:.                ||:|::      .|.:|:|
  Fly   701 IARMTYLWDIIAQKKCRTDRKELLEMK------GKVDYLA 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_611181.1 SET_SMYD <178..268 CDD:380997 32/164 (20%)
Smyd4-1NP_610500.2 SET 217..>252 CDD:394802 10/25 (40%)
zf-MYND 258..298 CDD:460312 11/41 (27%)
SET <359..549 CDD:394802 37/192 (19%)

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