DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-7 and smyd1a

DIOPT Version :9

Sequence 1:NP_001261039.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_991103.2 Gene:smyd1a / 321245 ZFINID:ZDB-GENE-030131-9825 Length:485 Species:Danio rerio


Alignment Length:456 Identity:98/456 - (21%)
Similarity:152/456 - (33%) Gaps:167/456 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 NPRTKGDCQMLIDVPINLSDYRDGEGMWQEHEE-----------------LVVRPL----MESGL 159
            ||.....|:.     .:..|.......|.||.:                 ||.|.|    ..:||
Zfish    61 NPHRCAQCKF-----AHYCDRTCQRAAWDEHRKECSAIRNIGKAPNENVRLVARILWRIQKHTGL 120

  Fly   160 ADVLPTQELTSDALHAHC----------IRID--------------------SNSFEVTAKDGDT 194
              |..:|..|.|.|..|.          :::|                    |:.|.|.:.:|.|
Zfish   121 --VSDSQLTTLDMLEDHLSRMTPEDLKELKVDVKTFYTYWPKKSKAVGEDYVSHLFGVISCNGFT 183

  Fly   195 LK----------GIFVWGATLPHHCVPNTVV--------ALDEQFN----MKLYAAVPLQPGDII 237
            |.          |:|.....:.|.|.||..|        |||..|:    ::|.|..|:..|..:
Zfish   184 LSDQRGLQSVGIGLFPNLCLVNHDCWPNCTVILNHGDQSALDASFHSSRRIELRALEPISAGQEL 248

  Fly   238 YNSYTNPLMGTSQRQHQLRLSRRLECICSRCLD-----------PTEMGTHMSSLKCKECPGFS- 290
            ..||.:.|..::.||..|:.....:|.|..|::           |||.|...|:...|:...|| 
Zfish   249 TVSYVDFLSVSTDRQRLLQQQYYFDCKCEHCVNGTKDELMTAVKPTEDGKQPSAEVVKQLTDFSL 313

  Fly   291 --VCEIDSNGKLGDWR-----CPDC----------------RALLTAAEV----HELQAAVGSAL 328
              :.:|::....|::.     |.:|                |.|.||:||    .:.|.|.|.| 
Zfish   314 QALVKIEAARAQGNFHEVIRICRECLEKQDPVFADTNVHVLRVLSTASEVLSFLQQFQEAAGYA- 377

  Fly   329 VDAMGDLQVYEALLTQYGPLLHPNHFMLLDIKQNIASILRAAALMNSMDQPCKKLLARRVELCSD 393
                      :.::..|..|.|||:..|      ..:|:||..         ....|..:|....
Zfish   378 ----------QRMVDGYMKLYHPNNAQL------GMAIMRAGV---------THWHAGLIEAAHG 417

  Fly   394 LLPVCRAVVPGISKLYAIGLFEY---------LLALVELVELQFAESDLSKKEYVAH-LRTASLV 448
            |  :|||        |.|.:..:         |.|:....|::...  ..:.|:|.| :|.|:|.
Zfish   418 L--ICRA--------YGILMITHGPHHPISKDLEAMRRQTEMELRM--FKQNEHVYHSMREAALT 470

  Fly   449 A 449
            :
Zfish   471 S 471

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_001261039.1 None
smyd1aNP_991103.2 zf-MYND 52..90 CDD:280009 7/33 (21%)
SET <203..252 CDD:279228 13/48 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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