DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SmydA-7 and SmydA-4

DIOPT Version :9

Sequence 1:NP_001261039.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_572675.1 Gene:SmydA-4 / 32034 FlyBaseID:FBgn0030257 Length:532 Species:Drosophila melanogaster


Alignment Length:494 Identity:129/494 - (26%)
Similarity:225/494 - (45%) Gaps:50/494 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 HDEKLGRHLVASIAIEPGDTILEERPLLVAPHWEC--HQLKCAQC-----LQESYVICRRCQVFP 69
            |.:..||:|||:..:|.|:|::.|.||.:.|   |  ....|..|     |:.....|..| .:|
  Fly    53 HSDIYGRYLVANRQLEAGETLIREEPLAIGP---CVSGDPVCLGCYHPVSLKADQYRCPGC-AWP 113

  Fly    70 LC-MDC------NQHDEFEC-----------EFFTSGAGKALCKDILVKNFGICGLLKLLLLLEN 116
            || ..|      :.|.|.||           |..|..||.|..:|:    :.:..::::|||.::
  Fly   114 LCGSTCAGLKHRHGHTETECQLYAERRAVAGELLTERAGPAEVRDL----YELVMIVRILLLRQH 174

  Fly   117 PRTKGDCQMLIDVPINLSDYRDGEGMWQEHEELVVRPLMESGLADVLPTQELTSDALHAHCIRID 181
            ...:  ..::..:..:..:.|....:|:.:||.||:.|..:     ...::|.::.:|..|..:|
  Fly   175 DPEQ--FALIARMESHTEERRQNAVLWRHYEEKVVQRLRVT-----WQLEDLEAEQVHEVCGILD 232

  Fly   182 SNSFEVTAKDGDTLKGIFVWGATLPHHCVPNTVVALD-EQFNMKLYAAVPLQPGDIIYNSYTNPL 245
            .|.||: .::|...:.::.....|.|.|.|||....| ..|.:.|..:..::..:.:..||...|
  Fly   233 VNCFEI-GQNGAKARTLYPSAFLLAHDCTPNTAHTDDPSSFEILLRTSRRVREREALTLSYAYTL 296

  Fly   246 MGTSQRQHQLRLSRRLECICSRCLDPTEMGTHMSSLKCKECPGFSVCEIDSNGKLGDWRCPDCRA 310
            .||.:|:..:...:...|.|.||.||.|:||..|:|.|..|...||..:|...:.|||.|..|..
  Fly   297 QGTLKRRAFMHEGKLFWCCCRRCSDPRELGTDCSALVCATCRTGSVRAVDPLQQTGDWACDRCAH 361

  Fly   311 LLTAAEVHELQAAVGSALVDA-MGDLQVYEALLTQYGPLLHPNHFMLLDIKQNIASIL-RAAALM 373
            .:.|.||......:.:.|.|. :.|:...|..|.:|..:|.|||::||..|.::..|. |....:
  Fly   362 KMGATEVERQLDRINNDLEDIDVHDIPGLENFLLRYRDVLRPNHYLLLSAKYSLCQIYGRTEGYL 426

  Fly   374 NSMDQPCKKLLARRVELCSDLLPVCRAVVPGISKLYAIGLFEYLLALVELVELQFAESDLSKKEY 438
              :.|...:.:||:...|.:.|.:...:.||:::|..:.::|....::.|.:..|....:|::|:
  Fly   427 --LPQMSPEDIARKESYCREFLEIVDVLDPGLTRLRGLIMYELHAPVMVLAQSAFQSGQISRQEF 489

  Fly   439 VAHLRTASLVATEAMDLLRFEPENSAEGYL----ADRIS 473
            ...|:....:...:.|:|..|||.|.|..:    ||.:|
  Fly   490 QRRLKEVVKLLQVSRDILLMEPEGSTENAMGQAAADALS 528



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR46455
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2203
54.920

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