DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-7 and set-10

DIOPT Version :9

Sequence 1:NP_001261039.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_493620.2 Gene:set-10 / 185237 WormBaseID:WBGene00009370 Length:430 Species:Caenorhabditis elegans


Alignment Length:452 Identity:96/452 - (21%)
Similarity:172/452 - (38%) Gaps:86/452 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 TILEERPLLVAPHWECHQLKCAQCL------QESYVI-CRRCQVFPLC-MDCNQHD-----EFEC 82
            |:..|:||......:..:|.||.|.      ||:.:: |..|.....| :.|.:.|     :|||
 Worm     3 TVAREQPLAAVLSPQFSELYCATCFLEIDSSQETEILTCDDCLAVSYCTLKCQRKDWKSCHQFEC 67

  Fly    83 EFFTSGAGKALCKDILVKNFGICGLLKLLLLLENPRTKG-DCQMLIDVPINLSDYRDGEGMWQEH 146
            |.... .|.:....:.:|   :|  :::||...:.:|.. :..:|.|:..|..::|..    .||
 Worm    68 EILRC-QGSSTPMTLTMK---LC--IRVLLASRSTQTPSFNGAVLEDLETNYKEFRSS----PEH 122

  Fly   147 EELV--VRPLMESGLADVLPTQELTSDALHAHCIRIDSNSFE-VTAKDGDTL-KGIFVWGATLPH 207
            .:.:  |..::.|...::.||...|:..:...| .:..|||. :..|..:.: .|::|..|...|
 Worm   123 NQFLSDVLTIISSSGQNIFPTSLETNKTIGIIC-SVLCNSFSIINEKRVEPIGSGLYVGVAKHNH 186

  Fly   208 HCVPNTVVALD----------EQFNMKLYAAVPLQPGDIIYNSYTNPLMGTSQRQHQLRLSRRLE 262
            .|...:.|..:          |:::.:|..            ||.:.::.||:|:..:|....|.
 Worm   187 SCASTSHVVFEGNQVFLRTNQEEYSKELTI------------SYVSRMLPTSERRKTIRGVHFLT 239

  Fly   263 CICSRCLDPTEMGTHMSSLKC--KECPGFSVCEIDSNGKLGDWRCPDCRALLTAAEVHELQAAVG 325
            |.|..|.: .|:.....|.||  |.|.||         ..|...|..|..|........:.:.:.
 Worm   240 CQCEMCKN-EELDLIGLSSKCRTKNCTGF---------VKGSGNCSVCEKLAFLPFEQSIHSTLN 294

  Fly   326 SALVD------------AMGDLQVYEALLTQYGPLLHPNHFMLLDIKQNIASILRAAALMNSMDQ 378
              |:|            .:.:|...:.|...|..:|...:..:|.:.:.||....:...:|.:| 
 Worm   295 --LLDIIENLHKTNQFTTVQELAYLQKLRADYQDILAECNVAILQLDEQIAYCSSSLENVNDLD- 356

  Fly   379 PCKKLLARR------VELCSDLLPVCRAVVPGISKLYAIGLFEYLLALVELVELQFAESDLS 434
              ..|:|.|      ..|......|.|.:..|...:..|...:..:.||:|::|....|.:|
 Worm   357 --LDLIAGRGSEHFITRLGIGAPEVTRRLYIGCKCISRISPSKRSVKLVKLIKLAIESSIIS 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_001261039.1 None
set-10NP_493620.2 zf-MYND 23..67 CDD:366792 11/43 (26%)
SET 57..247 CDD:394802 45/212 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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