DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-7 and set-30

DIOPT Version :9

Sequence 1:NP_001261039.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:NP_508850.2 Gene:set-30 / 180772 WormBaseID:WBGene00022499 Length:560 Species:Caenorhabditis elegans


Alignment Length:509 Identity:105/509 - (20%)
Similarity:165/509 - (32%) Gaps:181/509 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 CAQCLQESY-VICRRCQVFPLCMDCNQHDEFECEFFTSGAGKALCKDILVKNFGICGLLKLLLLL 114
            |..||.|:. :.|.:|:|...|..       :||  ||||         :.:...||.||     
 Worm    41 CWTCLGENVELTCEQCKVAKFCSK-------QCE--TSGA---------IDHKYECGPLK----- 82

  Fly   115 ENPRTKGDCQMLIDVPINLSDYRDG-----EGMWQEHEELVVRPLMESGLADVLPTQELTSDALH 174
            :.|....|.:|||.:.....|...|     :|.:...|.  .|.:||                :.
 Worm    83 KCPDLNTDERMLIRIVGRYKDIHSGKDKSIDGFYNNRES--KRSVME----------------IW 129

  Fly   175 AHC--IRIDSN---SFEVT----AKDGDTL--------------------------------KGI 198
            .||  ::.|.|   ||:.|    .:.|||.                                ||:
 Worm   130 EHCADMKKDENAMKSFKKTYDRVKQFGDTNHLMDEEVTFQLHSRNFINRHSISNVDYLREIGKGL 194

  Fly   199 FVWGATLPHHCVPNTVVALD---------------EQFNMKLYAAVPLQPGDIIYNSYTNPLMGT 248
            ::......|.|.||.:.:.:               |......|..:.|.|..|            
 Worm   195 YLDLCKYDHSCRPNAIYSCNGIVAKLRALHDNVDLENVETTHYTYIELPPCKI------------ 247

  Fly   249 SQRQHQLRLSRRLECICSRCLDPTEMGTHMSSLKCKECPGFSVCEIDSNGKLGDWRCPDCRALLT 313
             ||:|.|:.:...||.|.||.||.:  ..::|:.|..|  .|..|.....||             
 Worm   248 -QRRHMLKETWYFECHCERCDDPDD--NWLTSVLCPVC--ISKTEYRKTIKL------------- 294

  Fly   314 AAEVHELQAAVGSALVDAMGDLQVYEALLTQYGPLLHPNHFMLLDIKQNIASILRAAALMNSMDQ 378
                |..:|......::.:.| :....|..:|       .||.||..:.|...:..|.  :....
 Worm   295 ----HGPEAYANPETLEIVCD-RCSTTLDREY-------IFMALDGMRTIRRTVEGAE--DETKD 345

  Fly   379 PCKKLLARRVELCSDLLPVCRAVVPGISKLYAIGLFEYLLALVELVELQFAESDLSKKEYVA--- 440
            |.:.|     ::....|.....::| :|..|...|...::.|:..|       .::|||.:.   
 Worm   346 PIELL-----KIYQGALMTYERILP-MSNAYFCQLIAAMIPLISRV-------SMTKKERLVASL 397

  Fly   441 --HLRTASLV--------ATEAMDLLR-----FEPENSAEGYLADRISMELERI 479
              ||:..:.|        .::||..|:     .|..|..:   |.|..:|..||
 Worm   398 DLHLKCETFVRYVYRHAHPSKAMHFLQMGQLHLELANDKD---AARCLIEAHRI 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_001261039.1 None
set-30NP_508850.2 zf-MYND 41..78 CDD:366792 14/54 (26%)
SET_SMYD <179..266 CDD:380997 18/99 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG2084
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG55953
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2203
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.830

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