DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-7 and smyd2

DIOPT Version :9

Sequence 1:NP_001261039.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:XP_002934751.2 Gene:smyd2 / 100495522 XenbaseID:XB-GENE-985583 Length:430 Species:Xenopus tropicalis


Alignment Length:398 Identity:77/398 - (19%)
Similarity:131/398 - (32%) Gaps:113/398 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KCAQCLQESYVICRRCQVFPLCMDCNQHD----EFECEFFTSGAGKALCKDILVKNFGICGLLKL 110
            ||.:|.|..|     |.|     ||.:.|    :.||....: .|:..|....|:      |...
 Frog    62 KCGKCKQAFY-----CNV-----DCQKGDWPMHKLECSAMCT-YGQNWCPSETVR------LTAR 109

  Fly   111 LLLLENPRTKGDCQMLIDVPINLSDYRDGEGMWQEHEELVVRPLMESGLADVLPTQELTSDALHA 175
            :|..:..:|:.......   :::.|:       :.|...:....:|....|:.......|..||.
 Frog   110 ILAKQKTQTERTASERF---LSVKDF-------ESHLSKLDNEKLELIQNDIAALHRFYSKNLHY 164

  Fly   176 H--------CIRIDSNSFEVTAKDGDTL-KGIFVWGATLPHHCVPNTVVALDEQFNMKLYAAVPL 231
            .        ..:::.|.|.:..::...| ..||...|.:.|.|.||.:|...... .::.|...:
 Frog   165 SDNAAQVFLFAQVNCNGFTIEDEELSHLGSAIFPDVALMNHSCCPNVIVTYKGTV-AEVRAVQEI 228

  Fly   232 QPGDIIYNSYTNPLMGTSQRQHQLRLSRRLECICSRC----LDPTEMGTHMSS------------ 280
            ..||.::.||.:.|..|..|..:|..|....|.|..|    .||.::.....|            
 Frog   229 HAGDEVFTSYIDLLYPTEDRNDRLIDSYFFNCDCRECSTKQKDPAKLEIRKLSDPPSPQVVRDMI 293

  Fly   281 ------------LKCKECPG--FSVCEI----------DSNGKLGDWRCPDCRALLTAAEVHELQ 321
                        .|..:.|.  ..:||:          |||..:                :|.:.
 Frog   294 KYARNVVEEFRRAKHYKTPSELLEICELSLEKMGSVFEDSNVYM----------------LHMMY 342

  Fly   322 AAVGSALV--DAMGDLQVYEALLTQYGPLLHPNHFMLLDIKQNIASI-LRAAALMNSMDQPC--- 380
            .|:|..|.  |..|.|:..|.::..|.     .|:....:  |:||: |:...|...:::..   
 Frog   343 QAMGVCLYMQDWEGALKYGEKIIKPYS-----KHYPPYSL--NVASMWLKLGRLYMGLEKKAIGT 400

  Fly   381 ---KKLLA 385
               ||.:|
 Frog   401 KALKKAIA 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_001261039.1 None
smyd2XP_002934751.2 zf-MYND 50..88 CDD:280009 10/35 (29%)
SET 145..238 CDD:279228 19/93 (20%)
TPR_12 336..409 CDD:290160 18/96 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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