DRSC/TRiP Functional Genomics Resources

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Protein Alignment SmydA-7 and smyd3

DIOPT Version :9

Sequence 1:NP_001261039.1 Gene:SmydA-7 / 36916 FlyBaseID:FBgn0034182 Length:488 Species:Drosophila melanogaster
Sequence 2:XP_031758360.1 Gene:smyd3 / 100494527 XenbaseID:XB-GENE-854970 Length:448 Species:Xenopus tropicalis


Alignment Length:361 Identity:75/361 - (20%)
Similarity:132/361 - (36%) Gaps:86/361 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 CAQCL--QESYVICRRCQVFPLCMDCNQHDEFECEFFTSGAGKALCK-------DILVKNFGICG 106
            |..||  :|..:.|.:|:|   ...||.|    |:.......|..||       ::...:..:.|
 Frog    67 CDHCLHRKEKLLRCSQCKV---ARYCNSH----CQRKAWQGHKRECKCLRSTLPNVPPNSVRLVG 124

  Fly   107 LLKLLLLLENPRTKG-DCQMLIDVPINL----SDYRDGEGMWQEHEELVVRPLMESGLADV--LP 164
            .: :..:|:.|.|.. :...:.|:..::    .:.:||    ..|....::..::..:.::  ||
 Frog   125 KI-IFKMLQKPDTASEELYTISDLQSHIKEASEEVKDG----LRHLATALQHYLKEEIQEISQLP 184

  Fly   165 TQELTSDALHAHCIRIDSNSFEVTAKDG---DTLKGIFVWGATLPHHCVPNTVVALDEQFNMKLY 226
            ......:.......::..|||  |..||   |...|::...:.|.|.|.||.|:.. |...:.|.
 Frog   185 PGFQVLEYFGKVSAKVTCNSF--TISDGEMQDVGVGLYPSMSLLNHSCDPNCVIVF-EGTCLLLR 246

  Fly   227 AAVPLQPGDIIYNSYTNPLMGTSQRQHQLRLSRRLECICSRCL--------------DPTEMGTH 277
            ....:..|:.:..||.:..|.|..|:.||:......|.|.|||              ...|:.:.
 Frog   247 TVKEIPKGEELTISYIDVKMPTQGRRDQLQRQYCFLCDCQRCLLRDKDEDMLAGDAEASREVESS 311

  Fly   278 MSSLK--------------CKE------CPGFSV-------CEIDSNGKLGDWRCPDCRAL---L 312
            :|.|:              ||.      .|..::       |.:|::..||.|.    .||   |
 Frog   312 VSRLEELLSQNTAEEALNLCKTLMNRYYLPDKNIYQLKILDCAMDASIDLGLWE----EALHFGL 372

  Fly   313 TAAEVHELQAA----VGSALVDAMGDLQVYEALLTQ 344
            ...|.:.|..:    |.:..:..:|.||.|:.|..:
 Frog   373 RTLEPYSLYYSNYHPVRAVQLMKVGKLQNYQGLFAE 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmydA-7NP_001261039.1 None
smyd3XP_031758360.1 SET_SMYD3 24..289 CDD:380980 51/236 (22%)
zf-MYND 67..105 CDD:396356 12/44 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D981799at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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