Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_013475.1 | Gene: | ROM2 / 851086 | SGDID: | S000004363 | Length: | 1356 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1027 | Identity: | 194/1027 - (18%) |
---|---|---|---|
Similarity: | 357/1027 - (34%) | Gaps: | 315/1027 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 979 EIHS-TFLVPRAPLSWYRQDESLAREVDNVLQLEYDKVEILRTV-FLRSRKRAKDLISEQLREFQ 1041
Fly 1042 QKRTAGLGTIYGPTDDKLAEAKTDKLREQIIDKYLMPNLHALIEDENG--SPPEDVRKVALCSAL 1104
Fly 1105 STVIYRIFNTRPPPSSIVERVHHFVSRDKSFKSRIMGKNRKMNVRGHPLVLRQYYEVTHCNHCQT 1169
Fly 1170 IIWGVSPQGYHCTDCKLNIHRQCSKVVDESCPGPLPQAKRLAHNDKISKFMGKIRPRTSDV-IGN 1233
Fly 1234 EKRSRQDEELDVELTPDRGQASIVR------QPSDRR-----------PDANISIRSNGNTSCN- 1280
Fly 1281 ----------------------TSGLNTTDLQ---SSF--------------------------- 1293
Fly 1294 ----HGSCANDSINPGGGAG-----------CNMDLSTSVASTT------PSTSGSVAAG--LSA 1335
Fly 1336 FAELNALDTVDKEARRERYSQHP--------KHKSAPVSVNRSESYKERLSNKRNRNSRR----- 1387
Fly 1388 ----KTSDPSLS---------------------SRPNDEQLDLGLSNATYVGSS----------- 1416
Fly 1417 -NSSLSSAGGSESPSTSMEHFAAPGAAGGVQVPPMG--------LNQNQHP---------HLLIQ 1463
Fly 1464 QHAQQYCQQDSF------------QAGLAGAAGSSAASNSSFWNAGHPLPVARWTLESEDEDDVN 1516
Fly 1517 EADWSSMVAAEVLAALTDAEKKRQEIINEIYQTERNHVRTLKLLDRLFFLPLYESGLLSQDHLLL 1581
Fly 1582 LFPPALLSLREIHGAFEQSLK--QRRIEHNHVVNTIGDLLADMFDGQSGVVLCEFAAQFCARQQI 1644
Fly 1645 ALEALKEKRN--------KDEMLQKLLKKSESHKACRRLELKDLLPTVLQRLTKYPLLFENLYKV 1701
Fly 1702 TVRLLPE-NTTEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKLDRSSYDKEEFKKLDL 1765
Fly 1766 T--QHHLIHDGNLTIKKNP--------SVQLHGLLFENMIVLL-TKQDDKYY 1806 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | |
RGS_GEF_like | 934..1055 | CDD:188710 | 19/77 (25%) | ||
C1_1 | 1151..1202 | CDD:278556 | 8/50 (16%) | ||
RhoGEF | 1539..1731 | CDD:238091 | 43/202 (21%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 11/46 (24%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | |||
ROM2 | NP_013475.1 | ROM1 | 4..1356 | CDD:227709 | 194/1027 (19%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | mtm9245 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |