Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038944848.1 | Gene: | Arhgef1 / 60323 | RGDID: | 620951 | Length: | 979 | Species: | Rattus norvegicus |
Alignment Length: | 1255 | Identity: | 308/1255 - (24%) |
---|---|---|---|
Similarity: | 493/1255 - (39%) | Gaps: | 352/1255 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 858 GAAAAGPGVFIESHQFTPMAGASSPIPISLHSSHMHAAQSNDTQKEIISMEDEN--SDLDEPFID 920
Fly 921 ENGPFNNLTRLLEAENVTFLAIFLNYVISNSDPAPLLFYLITELYKEGTSKDMRKWAYEIHSTFL 985
Fly 986 ----VPRAPLSWYRQDESLAREVDNV---LQLEYDKVEILRTVFLRSRKRAKDLISEQLREFQQK 1043
Fly 1044 RTAGLGTIYGPTDDKLA-------------EAKTDKLREQIIDKYLMPNLHALIEDENGSPPEDV 1095
Fly 1096 RKVALCSALSTVIYRIFNTRPPPSSIVERVHHFVSRDKS---------FKSRIMGKNRKMNVRGH 1151
Fly 1152 PLVLRQYYEVTHCNHCQTIIWGVSPQGYHCTDCKLNIHRQCSKVVDESCPGPLPQAKRLAHNDKI 1216
Fly 1217 SKFMGKIR-----PRTSDVIGNEKRSRQDEELDVELTPDRGQASIVRQPSDRRPDANISIRSNGN 1276
Fly 1277 TSCNTSGLNTTDLQSSFHGSCAN--DSINPGGGAGCNMDLSTSVASTTPSTSGSVAAGLSAFAEL 1339
Fly 1340 NALDTVDKEARRERYSQHPKHKSAPVSVNRSESYKERLSNKRNRNSRRKTSDPSLSSRPNDEQLD 1404
Fly 1405 LGLSNATYVGSSNSSLSSAGGSESPSTSMEHFAAPGAAGGVQVPPMGLNQNQHPHLLIQQHAQQY 1469
Fly 1470 CQQDSFQAGLAGAAGSSAASNSSFWNAGHPLPVARWTLESEDEDDVNEADWSSMVAAEVLAALTD 1534
Fly 1535 AEKKRQEIINEIYQTERNHVRTLKLLDRLFFLPLYESGLLSQDHLLLLFPPALLSLREIHGAFEQ 1599
Fly 1600 SLKQRRIEHNHVVNTIGDLLADMFDGQSGVVLCEFAAQFCARQQIALEALKEKRNKDEMLQKLLK 1664
Fly 1665 KSESHKACRRLELKDLLPTVLQRLTKYPLLFENLYKVTVRLLPENTTEAEAIQRAVESSKRILVE 1729
Fly 1730 VNQAVKTAEDAHKLQNIQRKLD----RSSYDK--EEFKKLDLTQHHLIHDGNLT--IKKNPSVQL 1786
Fly 1787 HGLLFENMIVLLTKQDDKYYLKNLH----TPLSITNKPVSPIMSIDADTLIRQEAADKNSFFLIK 1847
Fly 1848 M--KTSQMLELRAPSSSECKTWFKHFSDVAARQSKNRSKNASSNHDTSISDPALAAIPH-----S 1905
Fly 1906 NTKESL----ELSTDTVQPLAATATLTTTPLAPMLPIATVTPAP-----ATNNSNVSSLTGVQLR 1961
Fly 1962 NPQRDATASESDADYV---NTPKPRSSQNEVNRTMSIRSTGEPIQKYSANGTEANDVTLRHSQS- 2022
Fly 2023 TRESVRPGSTGEERNSTYGM 2042 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | |
RGS_GEF_like | 934..1055 | CDD:188710 | 30/127 (24%) | ||
C1_1 | 1151..1202 | CDD:278556 | 2/50 (4%) | ||
RhoGEF | 1539..1731 | CDD:238091 | 75/191 (39%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 34/112 (30%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | |||
Arhgef1 | XP_038944848.1 | RGS_p115RhoGEF | 50..242 | CDD:188709 | 47/231 (20%) |
RhoGEF | 478..662 | CDD:214619 | 73/189 (39%) | ||
PH_p115RhoGEF | 696..820 | CDD:275429 | 40/141 (28%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166340346 | |
Domainoid | 1 | 1.000 | 135 | 1.000 | Domainoid score | I4839 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 327 | 1.000 | Inparanoid score | I2383 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D163264at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001574 | |
OrthoInspector | 1 | 1.000 | - | - | otm46036 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR45872 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
8 | 8.000 |