Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_697546.3 | Gene: | ngef / 569090 | ZFINID: | ZDB-GENE-130530-794 | Length: | 718 | Species: | Danio rerio |
Alignment Length: | 655 | Identity: | 134/655 - (20%) |
---|---|---|---|
Similarity: | 237/655 - (36%) | Gaps: | 168/655 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 1350 RRERYSQHPKHKSAPVSVNRSESYKERLSNKRNRNSRRKTSDPSLSSRPNDEQLDLGLSNATYVG 1414
Fly 1415 -SSNSSLSSAGG----------SESPSTSM------EHFAAPG-------AAGGVQVPPM----- 1450
Fly 1451 --GLNQNQHPHLLIQQH----AQQYCQQDSFQAGLAGAAGSSAASNSSFWNAGHPLPVARWTLES 1509
Fly 1510 EDEDDVNEAD-WSSMVAAEVLAALTDAEKKR---QEIINEIYQTERNHVRTLKLLDRLFFLPLYE 1570
Fly 1571 SGLLSQDHLLLLFPPALLSLREIHGAFEQSLK--QRRIEHNHVVNTIGDLLADMFDGQSGVVLCE 1633
Fly 1634 FAA--QFCARQQIALEALKEKRNKDEMLQK---------LLKKSESHKACRRLELKDLLPTVLQR 1687
Fly 1688 LTKYPLLFENLYKVTVRLLPENTTEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKLDR 1752
Fly 1753 SSYDKEEFKKLDLTQHHLIHDGNLTIKKNPSVQLHG------------------LLFENMIVLLT 1799
Fly 1800 KQD---DKYYLKNLHTPLSITNKPVSPIMSIDADTLIRQEAADKNSF----FLIKMKTSQ----- 1852
Fly 1853 MLELRAPSSSECKTWFKHFSDVAARQSKNRSKNAS-SNHDTSISDPALAAIPHSNTKESLELSTD 1916
Fly 1917 TVQPL 1921 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | |
RGS_GEF_like | 934..1055 | CDD:188710 | |||
C1_1 | 1151..1202 | CDD:278556 | |||
RhoGEF | 1539..1731 | CDD:238091 | 42/207 (20%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 23/134 (17%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | |||
ngef | XP_697546.3 | RhoGEF | 275..454 | CDD:279015 | 40/202 (20%) |
PH_ephexin | 475..601 | CDD:269929 | 25/151 (17%) | ||
SH3 | 615..668 | CDD:302595 | 6/24 (25%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |