Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021328624.1 | Gene: | arhgef2 / 561276 | ZFINID: | ZDB-GENE-030717-1 | Length: | 872 | Species: | Danio rerio |
Alignment Length: | 965 | Identity: | 217/965 - (22%) |
---|---|---|---|
Similarity: | 368/965 - (38%) | Gaps: | 223/965 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 1203 PLPQAKRLAHNDKISKFMGKIRPRTSDVIGNEKRSRQDEELDVELTPDRGQASIVRQPSDRRPDA 1267
Fly 1268 NISIRSNGNTSCNTSGLNTTDLQSSFHGSCANDSINPGGGAGCNMDLSTSVASTTPSTSGSVAAG 1332
Fly 1333 LSAFAELNALDTVDKEARRERYSQHPKHKSAPVSVNRSESYKERLSNKRN----RNSRRKTSDPS 1393
Fly 1394 LSSRPNDEQLDLGLSNATYVGS--SNSSLSSAGGSESPSTSMEHFAAPGAAGGV-QVPPMGLNQN 1455
Fly 1456 QHPHLLIQQHAQQYCQQDSFQAGLAGAAGSSAASNSSFWNAGHPLPVARWTLESEDEDDVNEADW 1520
Fly 1521 SSMVAAEVLAALTDAEKKRQEIINEIYQTERNHVRTLKLLDRLFFLPLYESGLLSQDHLLLLFPP 1585
Fly 1586 ALLSLREIHGAFEQSLKQRR-------IEHNHVVNTIGDLLADMFDGQSGVVLCEFAAQFCARQQ 1643
Fly 1644 IALEALKEKRNKDEMLQKLLKKSESHKACRRLELKDLLPTVLQRLTKYPLLFENLYKVTVRLLPE 1708
Fly 1709 NTTEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKLDRSSYDKEE----FKKLDLTQHH 1769
Fly 1770 LIHDGNLTIKKNPSVQL---HGLLFENMIVLLTKQDDKYYLKNLHTP--LSITNKPVSPIMSIDA 1829
Fly 1830 DTLIRQEAADKNSFFLIKMKT-SQMLELRAPSSSECKTWFKHFSDVAARQSKNRSKNASSNHDTS 1893
Fly 1894 I---SDPA----LAAIPHSNTKESLELSTDTVQPLAATATLTTTPLAPMLPIATVTPAPATNNSN 1951
Fly 1952 VSSLTGVQLRNPQRDATASESDADYVNTPKPRSSQN----EVNRTMSI--RSTGEPIQKYSANGT 2010
Fly 2011 EANDVTLRHSQSTRESV-------RPGSTGEERNSTYGMVGGNSKRDSA--SIVCSNNSN-NTRT 2065
Fly 2066 LLMQSPLVDPTA-----IQVSISPAHTAEPVLTPGE--KLRRLDASIRNDLLEKQ 2113 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | |
RGS_GEF_like | 934..1055 | CDD:188710 | |||
C1_1 | 1151..1202 | CDD:278556 | |||
RhoGEF | 1539..1731 | CDD:238091 | 55/198 (28%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 32/110 (29%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | |||
arhgef2 | XP_021328624.1 | C1 | 47..92 | CDD:237996 | 9/89 (10%) |
RhoGEF | 244..438 | CDD:238091 | 55/198 (28%) | ||
PH-like | 478..595 | CDD:327399 | 35/136 (26%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170580172 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |