Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_688794.4 | Gene: | fgd1 / 560305 | ZFINID: | ZDB-GENE-081104-33 | Length: | 995 | Species: | Danio rerio |
Alignment Length: | 900 | Identity: | 170/900 - (18%) |
---|---|---|---|
Similarity: | 299/900 - (33%) | Gaps: | 245/900 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 1109 YRIFNTRPPPSSIVERVHHFVSRDKSFKSRIMGKNRKMN----VRGH-----------PLVLRQY 1158
Fly 1159 YEVTHCNHCQTIIWGVSPQGYHCTDCKLNIHRQCSKVVDESCPGPLPQAKRLAHNDKISKFMGKI 1223
Fly 1224 RPRTSDVIGNEKRSRQDEELDVELTPDRGQASIVRQPSDRRPDANISIRSNGNTS--CNTSGLNT 1286
Fly 1287 TDLQSSFHGSCANDSINPG--GGAGCN---MDLSTSVASTTPSTSGSVAAGLSAFAELNA----- 1341
Fly 1342 -LDTVDKEARRERYSQHPKHKSAPVSVNRSESYKERLSNKRNRNSRRKTSD-----PSLSSRPND 1400
Fly 1401 E------QLDLGLSNATYVGSSNSSLSSAGGSE----------------------SPSTSMEHFA 1437
Fly 1438 APG--AAGGVQVPPMGLNQNQHPHLLIQQHAQQYCQQDSFQAGLAGAAGSSAASNSSFWNAGHPL 1500
Fly 1501 PVARWTLESEDEDDVNEADWSSMVAAEVLAALTDAEKKRQEIINEIYQTERNHVRTLKLLDRLFF 1565
Fly 1566 LPLYES-------------GLLSQDHLLLLFPPALLSLREIHGAFEQSLKQRRIEHNHVVNTIGD 1617
Fly 1618 LLADMFDGQSGVVLCEFAAQFCARQQIALEALKEKRNKDEMLQKLLKKSESHKACRRLELKDLLP 1682
Fly 1683 TVLQRLTKYPLLFENLYKVTVRLLPENTTEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQ 1747
Fly 1748 RKLDRSSYDKEEFKKLDLTQ--HHLIHDGN---LTIKKNPSVQLHGLLFENMIVLLTKQDDKYYL 1807
Fly 1808 KNLHTPLSITNKPVSPIMSIDADTLIRQEAADKN--SFFLIKMKTSQMLELRAPSSSECKTWFKH 1870
Fly 1871 FSDVAARQSKN----RSKNASSNHDTSISDPALAAIPHSNTKESLELSTDTVQPL 1921 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | |
RGS_GEF_like | 934..1055 | CDD:188710 | |||
C1_1 | 1151..1202 | CDD:278556 | 10/61 (16%) | ||
RhoGEF | 1539..1731 | CDD:238091 | 40/204 (20%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 23/109 (21%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | |||
fgd1 | XP_688794.4 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |