Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_009304999.1 | Gene: | arhgef15b / 555489 | ZFINID: | ZDB-GENE-060810-103 | Length: | 937 | Species: | Danio rerio |
Alignment Length: | 1303 | Identity: | 234/1303 - (17%) |
---|---|---|---|
Similarity: | 393/1303 - (30%) | Gaps: | 531/1303 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 700 PPLPPRLPGMMTED---------MSRGSCQNL----AQPNSVGTAFNYPLVSTTTAVQNDNLNIA 751
Fly 752 FPLSQRPNIVQQLQQYQQQQQHQMSGGQATGALGQTPNL-GKNKHRRVGS-SPDNM--HPRHPDR 812
Fly 813 ITKTTSGSWEIVEKDGESSPPGTPPPPYLSSSHMTVLEDPN-ENNRGAAAAGPGVFIESHQFTPM 876
Fly 877 AGASSP-IPISLHSSHMHAAQSNDTQKEII--SMEDENSDL-----DEPFIDENGPFNNLTRLLE 933
Fly 934 AEN-----VTFLA---IFLNYVISNSDPAPLLFYLITELYKEGTSKDMRKWAYEIHSTFLVPRAP 990
Fly 991 LSWYRQDESLAREVDNVLQLEYDKVEILRTVFLRSRKRAKDLISEQLREFQQKRTAGLGTIYGPT 1055
Fly 1056 DDKLAEAKTDKLREQIIDKYLMPNLHALIEDENGSPPEDVRKVALCSALSTVIYRIFNTRPPPSS 1120
Fly 1121 IVERVHHFVSRDKSFKSRIMGKNRKMNVRGHPLVLRQYYEVTHCNHCQTIIWGVSPQGYHCTDCK 1185
Fly 1186 LNIHRQCSKVVDESCPGPLPQAKRLAHNDKISKFMGKIRPRTSDVIGNEKRSRQDEELDVELTPD 1250
Fly 1251 RGQASIVRQPSDRRPDANISIRSNGNTSCNTSGLNTTDLQSSFHGSCANDSINPGGGAGCNMDLS 1315
Fly 1316 TSVASTTPSTSGSVAAGLSAFAELNALDTVDKEARR-----ERYSQHPKHKSAPVSVNRSESYKE 1375
Fly 1376 RLSNKRNRNSRRKTSDPSLSSRPNDEQLDLGLSNATYVGSSNSSLSSAGGSESPSTSMEHFAAPG 1440
Fly 1441 AAGGVQVPPMGLNQNQHPHLLIQQHAQQYCQQDSFQAGLAGAAGSSAASNSSFWNAGHPLPVARW 1505
Fly 1506 TLESEDEDDVNEADWSSMVAAEVLAALTDAEKKRQEIINEIYQTERNHVRTLKLLDRLFFLPLYE 1570
Fly 1571 SGLLSQDHLLL----LFPPALLSLREIHGAFEQSLKQRRIEHNHVVNTIGDLLADMFDGQSGVVL 1631
Fly 1632 CEFAAQ--FCARQQIALEALKEKRNKDEMLQK-------LLKKSESHKACRRLELKDLLPTVLQR 1687
Fly 1688 LTKYPLLFENLYKVTVRLLPENTTEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKLDR 1752
Fly 1753 SSYDKEEFKKLD----LTQHHLIHD--------------GNLTIKKNPSVQLHGLLFENMIVLLT 1799
Fly 1800 KQDDKYY--LKNLHTPL----SITNKPVSPIMSIDADTLIRQEAADKNSFFLIKMKTSQ--MLE- 1855
Fly 1856 -LRAPSSSECKTWFKHFSDVAARQSKNRSKNASSNHDTSISD---PALAAIPHSNTKESLELSTD 1916
Fly 1917 TVQ 1919 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | |
RGS_GEF_like | 934..1055 | CDD:188710 | 20/128 (16%) | ||
C1_1 | 1151..1202 | CDD:278556 | 4/50 (8%) | ||
RhoGEF | 1539..1731 | CDD:238091 | 45/204 (22%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 27/128 (21%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | |||
arhgef15b | XP_009304999.1 | RhoGEF | 511..688 | CDD:279015 | 43/200 (22%) |
PH_ephexin | 711..833 | CDD:269929 | 30/147 (20%) | ||
PH | 724..830 | CDD:278594 | 26/123 (21%) | ||
SH3_ephexin1_like | 852..906 | CDD:212727 | 4/22 (18%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |