Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021330686.1 | Gene: | net1 / 493607 | ZFINID: | ZDB-GENE-041121-18 | Length: | 605 | Species: | Danio rerio |
Alignment Length: | 497 | Identity: | 108/497 - (21%) |
---|---|---|---|
Similarity: | 212/497 - (42%) | Gaps: | 72/497 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 1516 NEADWSSMVAAEVLAALTDAEKKRQEIINEIYQTERNHVRTLKLLDRLFFLPLYESGLLSQDHLL 1580
Fly 1581 LLFP--PALLSLREIHGAFEQSLKQRRIEHNHVVNTIGDLLADMFDGQSGVVLCEFAAQFCARQQ 1643
Fly 1644 IALEALKEKRNKDEMLQKLLKKSESHKACRRLELKDLLPTVLQRLTKYPLLFENLYKVTVRLLPE 1708
Fly 1709 NTTEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKLDRSSY--DKEEFKKLDLTQHHLI 1771
Fly 1772 HDGNLTIKKNPSVQLHGLLFENMIVLL--TKQDDKYYLKNLHTPLSITNKPVSPIMSID-ADTLI 1833
Fly 1834 RQEAADKNSFFLIKMKTSQMLELRAPSSSECKTWFKHFSDVAARQS-KNRSKNA-SSNHDTSISD 1896
Fly 1897 PALAAIPHSNT---KESLELST-------DTVQPLAATATLTTTPLAPMLPIATVTPAPATNNSN 1951
Fly 1952 VSSLTGVQLRNPQRDATASESDADYVNTPKPRSSQNEVNRTM 1993 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | |
RGS_GEF_like | 934..1055 | CDD:188710 | |||
C1_1 | 1151..1202 | CDD:278556 | |||
RhoGEF | 1539..1731 | CDD:238091 | 47/193 (24%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 21/107 (20%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | |||
net1 | XP_021330686.1 | RhoGEF | 177..353 | CDD:214619 | 44/190 (23%) |
PH-like | 367..500 | CDD:327399 | 29/141 (21%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |