Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005158835.1 | Gene: | itsn2b / 445153 | ZFINID: | ZDB-GENE-050309-102 | Length: | 1837 | Species: | Danio rerio |
Alignment Length: | 2067 | Identity: | 354/2067 - (17%) |
---|---|---|---|
Similarity: | 630/2067 - (30%) | Gaps: | 708/2067 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 24 QEIPEESSI---QPPETSTSHTSTNGSSHSGPGTATGPGATSAGPSAGAPQSPVIVVDSV--PEL 83
Fly 84 PAPKQKSVKNSKSKQKQKQLANKSKIPRSPSLASSLSSLASSLSGHRDRDKDRDKDRENQNAVPP 148
Fly 149 QTPPLPPSYKQNQMNGDSTAAAGGGVSAPATPTTANNNNASHNNGSIMGGGVQLNQSDNSNPVLQ 213
Fly 214 APGERSSLNLTPLSRDLSGGHT--QESTTPATTPSTPS-LALPKNFQYLTLTVRKDSNGYGMKVS 275
Fly 276 GDNPV----FVESVKPGGAAEIAGLVAGDMI---LRVNGHEVRLEKHPTV-VGLI---------- 322
Fly 323 --KASTTVELAVKRSQKLTRPSSVSVVTPSTPILSGRDRTASITGPQPV-DSIKRREMETYKIQT 384
Fly 385 LQKMLEQEKL----NLERLKSDQNNPSYKLSEANIRKLREQ-------------LHQVGAEDAPT 432
Fly 433 VKLQA----------AAGNKNTALLTPNQIQHLSASATHSNQQFHHLHHHHNLHNNNYPPQQQPA 487
Fly 488 STSPAFLSLLPRSLSSLSLGTRKNKTEKDLTTSSPFGLTTDFLQQQRMSHQAESMSQSMHQHTST 552
Fly 553 PTSQQFFHPHQQQHRFKETGPTSKGKNKFLISRSLIEEDVPPPLPQRNPPRQLNLDLKNGNASPG 617
Fly 618 GSHLVAPVSDLD--RATSPQLNRSQQQQLPSSTDNSPSNAKSKRSKIKTKALSDPKMSTQMFLQM 680
Fly 681 ESASAAGAAGGSIEVDGGPPPLPPRLPGMMTEDMSRGSCQNLAQPNSVGTAFNYPLVSTTTAVQN 745
Fly 746 DNLNIAFPLSQRPNIVQQLQQYQQQQQHQMSGGQATGALGQTPNLGKNKHRRVGSSPDNMHPRHP 810
Fly 811 DRITKTTSGSW-EIVEKDGESSPPGTPPPPYLSSSHMTVLEDPNENNRGAAAAGPGVFIESHQFT 874
Fly 875 PMAGASSPIPISLHSSHMHAAQSNDTQKEIISMEDENSDLDEPFIDENGPFNNLTRLLEAENVTF 939
Fly 940 LAIFLNYVISNSDPAPLLFYLITELYKEGTSKDMRKWAYEIHSTFLVPRAPLSWYRQDESLAREV 1004
Fly 1005 DNVLQLEYDKVEILRTVFLRSRKRAKDLISEQLREFQQKRTAGLGTIYGPTDDKLAEAKTDKLRE 1069
Fly 1070 QIIDKYLMPNLHALIEDENGSPPEDVRKVALCSALSTVIYRIFNTRPPPSSIVERVHHFVSRDKS 1134
Fly 1135 FKSRI-MGKNRKMNVRGHPLVLRQYYEVTHCNHCQTIIWGVSPQGYHCTDCKLNIHRQCSKVVDE 1198
Fly 1199 SCPGPL----PQAKRLAHNDKISKFM-------GKIRPRTSDVIGNEKR---------------S 1237
Fly 1238 RQDEELDVELT---------------------------PD-------RGQASIVRQPSDRRPDAN 1268
Fly 1269 ISIR----SNGNTSCNTSGLNT--TDLQSSFHGSCANDSINPGGGAGCNMDLST----------- 1316
Fly 1317 ----------------SVASTTPSTSGSVAAGLSAFAE-LNALDTVDKEARRERYSQHPKHKSAP 1364
Fly 1365 VSVNRSESYKERLSNKRNRNSRRKTSDPSLSSRPNDEQLDLGLSNATYV---GSSNSSLSSAGGS 1426
Fly 1427 ESPSTSMEHFAAPGAAGGVQ---VPP----MGLNQNQHPHLLIQQHAQ-QYCQQDSFQAGLAGAA 1483
Fly 1484 GS-SAASNSSFWNAGHPLPVARWTLESEDE-----------DDVNEADW--------SSMVAAEV 1528
Fly 1529 LAALTDA-------------------EKKRQEIINEIYQTERNHVRTLKLLDRLFFLPLYESGLL 1574
Fly 1575 SQDHLLLLFPPALLSLREIHGAFEQSLKQRRIE-----HNHVVNTIGDLLADMFDGQSGVVLCEF 1634
Fly 1635 AAQFCARQQIALEALKEKRNKDEMLQKLLKKSESHKACRRLELKDLLPTVLQRLTKYPLLFENLY 1699
Fly 1700 KVTVRLLPENTTEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKLD-RSSYDKEEFKKL 1763
Fly 1764 D--LTQHHLIHDGNLTIKKNPSVQLHGLLFENMIV---------------LLTKQDDKYYLKNLH 1811
Fly 1812 TPLSI------------TNKPVSPIMSIDADTLIRQEAADKNSFFLIKMKTS 1851 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | 18/93 (19%) |
RGS_GEF_like | 934..1055 | CDD:188710 | 18/120 (15%) | ||
C1_1 | 1151..1202 | CDD:278556 | 5/50 (10%) | ||
RhoGEF | 1539..1731 | CDD:238091 | 48/196 (24%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 21/109 (19%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | |||
itsn2b | XP_005158835.1 | EH | 7..99 | CDD:197477 | 4/13 (31%) |
EH | 19..83 | CDD:238009 | |||
Amelogenin | <80..183 | CDD:197891 | 18/97 (19%) | ||
EH | 232..327 | CDD:197477 | 27/118 (23%) | ||
EH | 243..308 | CDD:238009 | 19/73 (26%) | ||
TAF4 | <453..592 | CDD:296797 | 32/203 (16%) | ||
DUF4349 | <559..691 | CDD:305044 | 38/309 (12%) | ||
SH3 | 936..992 | CDD:302595 | 6/55 (11%) | ||
SH3 | 1051..1102 | CDD:302595 | 6/50 (12%) | ||
SH3_Intersectin_3 | 1126..1177 | CDD:212772 | 10/62 (16%) | ||
SH3_Intersectin2_4 | 1198..1256 | CDD:212927 | 11/57 (19%) | ||
SH3_Intersectin2_5 | 1271..1324 | CDD:212929 | 8/52 (15%) | ||
RhoGEF | 1355..1535 | CDD:279015 | 47/193 (24%) | ||
PH_ITSN | 1562..1692 | CDD:270084 | 23/123 (19%) | ||
PH | 1576..1684 | CDD:278594 | 21/109 (19%) | ||
C2_Intersectin | 1695..1829 | CDD:176021 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |