Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_227201.4 | Gene: | Arhgef26 / 310460 | RGDID: | 1562559 | Length: | 869 | Species: | Rattus norvegicus |
Alignment Length: | 857 | Identity: | 161/857 - (18%) |
---|---|---|---|
Similarity: | 298/857 - (34%) | Gaps: | 258/857 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 1175 SPQGYHCTDCKLNIHRQCSKVVDESCPGPLPQAKRLAHNDKISKFMGKIRPRTSDVIGNEKRSRQ 1239
Fly 1240 DEELDVELTPDRGQASIVRQPSDRRPDAN-ISIRSNGNTSCNTSGLNTTDLQSSFHGSCANDSIN 1303
Fly 1304 PGGGAGCNMDLSTSVASTTPSTSGSVAAGLSAFAELNALDTVDKEARRERYSQHPK-HKSAPV-- 1365
Fly 1366 ---SVNRSESYKERLS-NKRNRNSRRKTSDPSLSSRPNDEQLDLGLSNATYVGSSNSSLSSAGGS 1426
Fly 1427 ESPSTSMEHFAAPGAAGGVQVPPMGL----------NQNQHPHLLIQQHAQQYCQQDSFQAGLAG 1481
Fly 1482 AAG----SSAASNS---------------------SFWNAGHPL----------PVARWTLE--- 1508
Fly 1509 ---------------------------------------SEDEDDVNE---------------AD 1519
Fly 1520 WSSMVAAE---VLAALTDAEKKRQEIINEIYQTERNHVRTLKLLDRLF--FLPLYESGLLSQDHL 1579
Fly 1580 LLLFPPALLSLREIHGAFEQSLK-----QRRIEHNHVVNTIGDLL----ADMFDGQSGVVLCEFA 1635
Fly 1636 AQFCARQQIALEALKEKRNKDEMLQKLLKKSESHKACRRLELKDLLPTVLQRLTKYPLLFENLYK 1700
Fly 1701 VTVRLLPENTTEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKLDRSSYDKEEFK---- 1761
Fly 1762 KLDLTQHHLIHDGNLTI---------KKNPSVQLHGLLFENMIVLLTKQDDKYYLKN---LHTPL 1814
Fly 1815 ---SITNKPVSPIMSIDADTLIRQEAADKNSFFLIKMKTSQMLE-----LRAPSSSECKTWFKHF 1871
Fly 1872 SDVAARQSKNRS 1883 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | |
RGS_GEF_like | 934..1055 | CDD:188710 | |||
C1_1 | 1151..1202 | CDD:278556 | 5/26 (19%) | ||
RhoGEF | 1539..1731 | CDD:238091 | 45/202 (22%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 23/124 (19%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | |||
Arhgef26 | XP_227201.4 | TDA11 | 140..>348 | CDD:293689 | 51/243 (21%) |
RhoGEF | 441..620 | CDD:279015 | 42/200 (21%) | ||
PH_ephexin | 641..779 | CDD:269929 | 25/137 (18%) | ||
SH3_ARHGEF16_26 | 791..845 | CDD:212871 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |