Sequence 1: | NP_477317.1 | Gene: | RhoGEF2 / 36915 | FlyBaseID: | FBgn0023172 | Length: | 2559 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038961459.1 | Gene: | Akap13 / 293024 | RGDID: | 727893 | Length: | 2793 | Species: | Rattus norvegicus |
Alignment Length: | 2735 | Identity: | 525/2735 - (19%) |
---|---|---|---|
Similarity: | 897/2735 - (32%) | Gaps: | 886/2735 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 IPEESSIQPPETSTSHTSTNGS-----SHSGPGTATGPGATSAGPSAGAPQSPVIVVD------S 79
Fly 80 VPELPAPKQKSVKNSKSKQKQKQLANKSKIPRSPSLASSLSSLA-----SSLSGH------RDRD 133
Fly 134 KDRDKDRENQNAVP--PQTPPLPPSYKQNQMNGDSTAAAGGGVSAPATPTTANNNNASHNNGSIM 196
Fly 197 GGGVQLNQSDNSNPVL-QAPGERSSLNLTPLSRDLSGGHTQESTTPATTPSTPSLALPKNFQYLT 260
Fly 261 LTVRKDSNGYGMKVSGDNPVFVESVKPGGAAEIAGL-------VAGDMILRVNGHEVRLEKHPTV 318
Fly 319 VGLIKASTTVELAVKRSQKLTRPSSVSVVTP--STPI-LSGRDRTASITGPQPVDSIKRREMETY 380
Fly 381 KIQTLQKMLEQEKLNLERLKSDQNNPS-----YKLSEANIRKL---REQLHQVGAEDAPTVKLQA 437
Fly 438 -AAGNKNTA-----LLTPNQIQHLSASATHSNQQFHHLHHHHNLHNNNYPPQQQPASTSPAFLSL 496
Fly 497 LPRSLS--------SLSLGTR----KNKTE---------KDLTTSSPFGLTTDFLQQQRMSHQAE 540
Fly 541 SMSQSMHQHTSTPTS-------------QQFFHPHQQQ---HRFKETG-----PTSKGK---NKF 581
Fly 582 LISRSLIEEDVPPPLPQRNPPRQLNLDLKNGNASPGGSHLVAPVSDLDRATSPQLNRSQQQQLPS 646
Fly 647 STDNSPSNAKSKRSKIKTKALSDP-------KMSTQMF-LQMESASAAGAAGGSIEVDGGPPPLP 703
Fly 704 PR----------------LPG-----MMTEDMSRGSCQ-NLAQPNSVGTAFNYP-----LVSTTT 741
Fly 742 AVQNDNLNIAFPLSQRPNIVQQLQQYQQQQQHQMSGGQATGALGQTPNLGKNKHRRVGSSPDNMH 806
Fly 807 PRHPDRITKTTSGSWEIVEKDGE-----SSPPGTPPPPYL------------------SSSHMTV 848
Fly 849 LEDPNENNRGAAAAGPGVFIESHQFTPMAGASS----PIPISLHSSHMHAAQSNDTQKEIISMED 909
Fly 910 ENSDLDEPFIDENGPFNNLTRLLEAENVTFLAIFLNYVISNSDPAPLLFYLITELYKEGTSKDMR 974
Fly 975 KWAYEIHSTFLVPRAPLSWYRQDESLAREVDNVLQLEYDKVEILRTVFLRSRKRAKDLISEQLRE 1039
Fly 1040 FQQKRTAGLGTIYGPTDDKLAEAKTDKLREQIIDKYLM--PNLH---------------ALIEDE 1087
Fly 1088 N---------------GSPPEDVRKVALCSALSTVIYRIFNTRPPPSSIV----------ERVHH 1127
Fly 1128 -FVSRDKSFKSRIMGKNRKMNVRGHPLVLRQYYEVTHCNHCQTI-IWGVSPQG------YHCTDC 1184
Fly 1185 KLNIHRQCSKVVDESC----PGPLPQAKRLAHNDKISKFMGKIRPRTSDVIGNEKRSRQDEELDV 1245
Fly 1246 ELTPDRGQASIVRQPSDRRPDANISIRSNGNT----------SCNTSGLNTTDLQSSFHGSCAND 1300
Fly 1301 SINPGGGA----GCNMDLSTSVASTTPSTSGSVAAGLSAFAELNALDTVDKEARRERYSQHPKHK 1361
Fly 1362 ------------SAPVSVNRSESYKERLSNKRNRNSRRKTSDPSLSSRPNDEQLD---LGLSNAT 1411
Fly 1412 -------YVGSSNSSLSSAGGSESPSTSMEHFAAPGAAGGVQVPPMGLNQNQHPHLLIQQHAQQY 1469
Fly 1470 CQQDSFQAGLAGAAGSSAASNSSFWNAGHPLPVARWTLESEDEDDVNEADWSSMVAAEVLAALTD 1534
Fly 1535 AEKKRQEIINEIYQTERNHVRTLKLLDRLFFLPLYESGLLSQDHLLLLFPPALLSLREIHGAFEQ 1599
Fly 1600 SLKQR-------RIEHNHVVNTIGDLLADMFDGQSGVVLCEFAAQFCARQQIALEALKEKRNKDE 1657
Fly 1658 MLQKLLKKSESHKACRRLELKDLLPTVLQRLTKYPLLFENLYKVTVRLLPENTTEAEAIQRAVES 1722
Fly 1723 SKRILVEVNQAVKTAEDAHKLQNIQRKLDRSSYDK----EEFKKLDLTQHHLIHDGNLTIKKNPS 1783
Fly 1784 --VQLHGLLFENMIVLLTKQDDKYYLKNL-HTPLSITNKPVSPIMSIDADTLIRQEAADKNSFFL 1845
Fly 1846 IKM--KTSQMLELRAPSSSECKTWFKHFSDVAARQSKNRSKNASSNHDTSISDPALAAIPHSNTK 1908
Fly 1909 ESLE-------LSTDTVQPLAATATLTTTPLAPMLPIATVTPAPATNNSNVSSLTGVQLRNPQRD 1966
Fly 1967 ATASESDADYVNTPKPRSSQNEVNRTMSIRS------TGEPIQKYSANGTEANDVTLRHSQST-- 2023
Fly 2024 --------------RESVRPGSTGEERNSTYGM-VGGNS------KRDSASIVCS-NNSNNTRTL 2066
Fly 2067 LMQSPLVDPTAIQVSISPAHTAEPVLTPGEKLRRLDASIRNDLLEKQKIICDIFRLPVEHYDQIV 2131
Fly 2132 DIAMMPEAPKDSADIALAAYDQIQTLTKMLNEYMHVTPEQEVSAVSTAVCGHCHEKEKLRKKVAP 2196
Fly 2197 SSSFSSSPPPLPPPNRQHAQAQAQIPPSRLMPKLQTLDLDEVAIHEDDDGY-CEIDELRLPAIPS 2260
Fly 2261 KPHERPTTPLAPFNTEPKTSQSVIDASKRQSTDAVPEGLLEQEPLEGDKTETKGEDNEVKTVP-- 2323
Fly 2324 ---SDKLSESCNEERQCVEADITKEVADPTTSKNEAAASVDELPSQSREIKTAENASKSVADK-- 2383
Fly 2384 ----KEDNEETIEEGVASTVDSSTQTS--------PTESPKETDKLTGGSSSTCGPNRIQHASVL 2436
Fly 2437 EPSVP 2441 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
RhoGEF2 | NP_477317.1 | PDZ | 260..334 | CDD:214570 | 11/80 (14%) |
RGS_GEF_like | 934..1055 | CDD:188710 | 16/120 (13%) | ||
C1_1 | 1151..1202 | CDD:278556 | 9/61 (15%) | ||
RhoGEF | 1539..1731 | CDD:238091 | 60/198 (30%) | ||
PH_RhoGEF | 1770..1875 | CDD:275411 | 28/109 (26%) | ||
DUF2413 | 2242..>2378 | CDD:287302 | 24/141 (17%) | ||
Akap13 | XP_038961459.1 | PHA03307 | 545..>837 | CDD:223039 | 56/267 (21%) |
C1_AKAP13 | 1769..1824 | CDD:410428 | 12/63 (19%) | ||
RhoGEF | 1975..2169 | CDD:238091 | 60/198 (30%) | ||
PH_AKAP13 | 2212..2314 | CDD:275427 | 28/111 (25%) | ||
SMC_prok_B | <2509..>2669 | CDD:274008 | 42/253 (17%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5422 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.810 |