DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF2 and ARHGEF16

DIOPT Version :9

Sequence 1:NP_477317.1 Gene:RhoGEF2 / 36915 FlyBaseID:FBgn0023172 Length:2559 Species:Drosophila melanogaster
Sequence 2:XP_016856538.1 Gene:ARHGEF16 / 27237 HGNCID:15515 Length:726 Species:Homo sapiens


Alignment Length:623 Identity:120/623 - (19%)
Similarity:209/623 - (33%) Gaps:184/623 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1359 KHKSAPVSVNRSESYKERLSNKRNRNSRRKTSDPSLSSRPNDEQLDLGLSNATYVGSSNSSLSSA 1423
            :|:|...:|         ||.:..|...:....||.|....|...|.|       |....:|.  
Human   121 RHQSFGAAV---------LSREAARRDPKLLPAPSFSLDDMDVDKDPG-------GMLRRNLR-- 167

  Fly  1424 GGSESPSTSMEHFAAPGAAG-GVQVPPMGLNQNQHPHLLIQQHAQQYCQQDSFQAGLAGAAGS-- 1485
              ::|...:|:....||..| .:|:.|......:.|.   |.|.:...:.........|..||  
Human   168 --NQSYRAAMKGLGKPGGQGDAIQLSPKLQALAEEPS---QPHTRSPAKNKKTLGRKRGHKGSFK 227

  Fly  1486 ----------SAASNSSFWNAGHPLPVARWTLESEDEDDVNEAD--------------------- 1519
                      ....|:|               :..|:|.::|:.                     
Human   228 DDPQLYQEIQERGLNTS---------------QESDDDILDESSSPEGTQKVDATIVVKSYRPAQ 277

  Fly  1520 --WSSM---VAAEVLAALTDAEKKRQEIINEIYQTERNHVRTLKLLDRLFFLPLYESGLLSQDHL 1579
              ||.:   |...:|..|:..|:||||.:.||..:|                       .|..|.
Human   278 VTWSQLPEVVELGILDQLSTEERKRQEAMFEILTSE-----------------------FSYQHS 319

  Fly  1580 LLLFPPALLSLREIHGAFEQSLKQRRIEHNHVVNTIGDLLA-------DMFDGQSGVVLCEFAAQ 1637
            |.:.....|..:|:.....|      :||:|:.:.|.|:|.       |:.......||.|..:.
Human   320 LSILVEEFLQSKELRATVTQ------MEHHHLFSNILDVLGASQRFFEDLEQRHKAQVLVEDISD 378

  Fly  1638 ---------------FCARQQIALEALKEKRNKDEMLQKLLKKSESHKACRRLELKDLLPTVLQR 1687
                           :|:.:......|::..:.:...::.|::.|...||..|.:...|...:||
Human   379 ILEEHAEKHFHPYIAYCSNEVYQQRTLQKLISSNAAFREALREIERRPACGGLPMLSFLILPMQR 443

  Fly  1688 LTKYPLLFENLYKVTVRLLPENTTEAEAIQRAVESSKRILVEVNQAVKTAEDAHKLQNIQRKLDR 1752
            :|:.|||.:.|...|    ..::...:|..||:::..:::.:.|:.....|...::..:..:||.
Human   444 VTRLPLLMDTLCLKT----QGHSERYKAASRALKAISKLVRQCNEGAHRMERMEQMYTLHTQLDF 504

  Fly  1753 SSYDKEEFKKLDL--TQHHLIHDGNL----------TIKKNPSVQLHGLLFENMIVLLTKQDDKY 1805
            |     :.|.|.|  ....|:..|.|          .|...|:..|  .||.:::|:..|:.::.
Human   505 S-----KVKSLPLISASRWLLKRGELFLVEETGLFRKIASRPTCYL--FLFNDVLVVTKKKSEES 562

  Fly  1806 YLKNLHTPLSITNKPVSPIMSIDADTLIRQEAADKNSFFLIKMKTSQMLELRAPSSSECKTWFKH 1870
            |:.                          |:.|..|...:.|::.|   ||..|......:...|
Human   563 YMV--------------------------QDYAQMNHIQVEKIEPS---ELPLPGGGNRSSSVPH 598

  Fly  1871 -FSDVAARQSKNRSKNASSNHDTSISDPA--LAAIPHS 1905
             |.....|.|:.|.:....:.| |.||.|  :.|:.||
Human   599 PFQVTLLRNSEGRQEQLLLSSD-SASDRARWIVALTHS 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF2NP_477317.1 PDZ 260..334 CDD:214570
RGS_GEF_like 934..1055 CDD:188710
C1_1 1151..1202 CDD:278556
RhoGEF 1539..1731 CDD:238091 41/213 (19%)
PH_RhoGEF 1770..1875 CDD:275411 21/115 (18%)
DUF2413 2242..>2378 CDD:287302
ARHGEF16XP_016856538.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5422
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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