DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGEF2 and rgf2

DIOPT Version :10

Sequence 1:NP_477317.1 Gene:RhoGEF2 / 36915 FlyBaseID:FBgn0023172 Length:2559 Species:Drosophila melanogaster
Sequence 2:NP_594853.1 Gene:rgf2 / 2542953 PomBaseID:SPAC1006.06 Length:1158 Species:Schizosaccharomyces pombe


Alignment Length:783 Identity:154/783 - (19%)
Similarity:275/783 - (35%) Gaps:210/783 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1235 KRSRQDEELDVELTPDRGQASIVRQPSDRRPDANISIRSNGNTSCNTSGLNTTDLQSSFHGSCAN 1299
            :||...::..:.....|.:...:.:|..|: ..::|..|||::..|..       ::|.|.:...
pombe   102 RRSSSTDDFGISHARSRKEIQSLGRPHTRQ-SFSVSDVSNGSSYPNIR-------KNSVHVNAPM 158

  Fly  1300 DSINPGGGA-----GCNMDLSTSVASTTPSTSGSVAA---------------------------- 1331
            .|...|..|     ......::::::..||.|.|.::                            
pombe   159 PSFPEGSTAVLLKHHSGSKSASAISNIAPSHSNSTSSRRPYIHPAFLSQVAVEFRKRLNIGDRVK 223

  Fly  1332 -GL---SAFAELNALD-------TVD--------------------------KEARRERYSQHPK 1359
             ||   .||....|:|       |.|                          :::.:|.| |:.:
pombe   224 DGLLYKDAFLGSEAVDVLMHIVRTTDRNLALLLGRALDSQKMFHDVTYSHRLRDSLKEVY-QYRR 287

  Fly  1360 HKSAPVSVNRSESYKERLSNKRNRNSRRKTSDPSLSSRPNDEQLDLGLSNATYVGS---SNSSLS 1421
            ..|.|..::..:|....:.|......||..:..|..|..:|......:|::..|.|   ..||||
pombe   288 IISPPPGLSSMDSNGSSIENNFLYTKRRANTSDSFDSVLSDSSTTPTISSSVQVNSLAFITSSLS 352

  Fly  1422 S-AGGSESPSTS----------MEHFAAPGAAGGVQVP---PMGLNQNQHPHLLIQQHAQQYCQQ 1472
            : ....|:|.|.          .|.:::..:...:...   |..|.|....||.:          
pombe   353 AITKEPEAPETEYNPHGVFTLLTECYSSTCSRNRLCYSISCPRRLEQQARLHLKV---------- 407

  Fly  1473 DSFQAGLAGAAGSSAASNSSFWNAGHPLPVARWTLESEDEDDVNEADWSSMVAAEVLAALTDAEK 1537
               |..|:|  ||::.:                     |:.:.:...||..|..:|:..:...|.
pombe   408 ---QPVLSG--GSTSIT---------------------DKQEEDHRLWSENVPKQVVDQIDVREW 446

  Fly  1538 KRQEIINEIYQTERNHVRTLKLLDRLFFLPLYESGLLSQDHLLLLFPPALLSLREIHGAFEQ--S 1600
            ||||||.|:..|||:.||.|:.:...:..||..|.::.:::..........::.:||....:  :
pombe   447 KRQEIIFEVIYTERDFVRDLEYIRDFWIKPLSTSNVIPENNRQQFIRCVFHNIMQIHAVNSRLSN 511

  Fly  1601 LKQRRIEHNHVVNTIGDLLADMFDGQSGVVLCEFAAQFCARQQIALEALKEKRNKDEMLQKLLKK 1665
            ...|......||||||||..|.      |...|...::.|.|.||....:.:::.:......:.:
pombe   512 ALNRTQTLQPVVNTIGDLFLDY------VPKFEPFIKYGANQAIAKFEFEREKSTNRNFANYVHE 570

  Fly  1666 SESHKACRRLELKDLLPTVLQRLTKYPLLFENLYKVTVRLLPENTTEAEAIQRAVESSKRILVEV 1730
            .|..:..|:|||...|.....||.:||||...:.|.|    .::..:.|.|.|.:|..:..|.::
pombe   571 VERLRESRKLELNGYLTKPTTRLARYPLLLSGVLKYT----DKDNPDTENIPRVIEMIREFLTKL 631

  Fly  1731 NQAVKTAEDAHKLQNIQRKLDRSSYDKEEFKKLDLTQHHLIHDGNLTIK----KNPSVQ--LHGL 1789
            |......|:...|..:..:|..|..|:.:....| ....||..|.:.:|    .|...:  :|..
pombe   632 NYETGKTENRLSLLQLNEQLSCSPADRAKLTLFD-PSRLLIFKGVVKLKASSYSNGDTENDIHMF 695

  Fly  1790 LFENMIVL------LTKQDDKYYLKN----------------------------LHTPLSITNKP 1820
            |.:|.::|      :.::..|.:|:.                            |..|:|||...
pombe   696 LLDNFLLLCKIKIQMKRRVHKLHLRPLPLELLSISYIEDSPSRGSLPRRPSSALLTNPISITKSN 760

  Fly  1821 VSPI----------------MSIDADTLIRQEA----ADKNSFFLIKMKTSQMLELRAPSSSECK 1865
            ..|:                :|:..:|||.::.    .:|....:  .|...:.|.|...   |:
pombe   761 PPPVKAYGLQLVFIGARGFSISLYLNTLIARDQWKQHIEKQQDII--RKRHLVFESRGIC---CQ 820

  Fly  1866 TWF 1868
            :||
pombe   821 SWF 823

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGEF2NP_477317.1 PDZ_ARHGEF11-12-like 258..333 CDD:467282
RGS_GEF_like 934..1055 CDD:188710
C1_ARHGEF-like 1150..1202 CDD:410382
RhoGEF 1539..1731 CDD:238091 52/193 (27%)
PH_16 1756..1876 CDD:436083 30/173 (17%)
rgf2NP_594853.1 ROM1 1..1148 CDD:227709 154/783 (20%)
Blue background indicates that the domain is not in the aligned region.

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